| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is galM [C]
Identifier: 123969339
GI number: 123969339
Start: 1539472
End: 1540326
Strand: Reverse
Name: galM [C]
Synonym: A9601_18071
Alternate gene names: 123969339
Gene position: 1540326-1539472 (Counterclockwise)
Preceding gene: 123969340
Following gene: 123969338
Centisome position: 92.24
GC content: 29.36
Gene sequence:
>855_bases GTGCAAATTAAATTATCTAATAAGGACCAAGGGATTTTTGTCTTTCAATTAGATAAAAGTAATTACATTAAATTTTGTCC TGAAAGAGGAGGCGTTATTACAAATTGGGTTTCGGATGGTAATGAAATACTTTATTTCGATGAAACAAGATTTATGGACA AGACAAAAAGTATTAGGGGAGGCATTCCAATCTTGTTTCCAATTTGTGGAAATCTCAATACATCTAGTTCAGTATTTGGA AATGGTTATTTGCAATTACCACAACATGGTTTCGCTAGGGATTTGCAATGGCAATACTCCTTCAATGAAAATGAAAAATT TTTATGTTTATTCTTAAATGCATCTAAACAAACCAAAAAATATTATCCTTTCGATTTCGAACTAAAAATAGAAGTTACCT TGAAAATTAACTTTTTAGAATTTGAAATTACAATCCATAACAAAACAGATTTTGCTATGCCTATAAATTTTGGATTGCAT CCTTATTTTAATATTTCGGATTTCAAAAATTTAGAGTTTGTTGATAATCCACTTAATTGTCAGGATCAAGAAAGGAATAC TATAAGTAATACTTTGGATGAATTAAACAAAATTAATTTAGGAGTTGATCTACTTATGTATACTTCCGGTAGAAGCTCTT TTCGAGATAAGATTTTTAAAAGAGAGGTAACTTTAAATCATCCATATCCTTTTGATTTAGGCGTTATTTGGAGTGATCCT CCAAGAAGAATGATATGTCTCGAACCTTGGACTAGTCCCCGAAATTCTTTTGTTGATGGATTTAGAAACATTATGATTCC TTCAAATGATAGTAAAAGGTTAAATTCCTCAATACAAATAAAATCTCTTAAGTAA
Upstream 100 bases:
>100_bases AGAAATTATTCTTGATGCAGGACATTGCCCTCATGATGAGATACCTGAATTAGTTAATCAGCATATATTGGATTGGGTTG ATTCTCTTTGAGTAACAGTT
Downstream 100 bases:
>100_bases TTTTGCAATACTTATGAAATTTGTCGTTATAGATGATGATCCCACAGGCTCTCAAACTGTTCACGATTGCTTATTACTGC TTAAGTGGGACTGCTCAACT
Product: galactose mutarotase
Products: NA
Alternate protein names: Galactose Mutarotase-Like Protein; Galactose Mutarotase; Aldose 1-Epimerase Family Protein; Aldose 1-Epimerase Subfamily Protein; LacX Protein; Galactose Mutarotase ; Aldose 1-Epimerase Family Protein LacX; Galactose Mutarotase-Related; Aldose 1-Epimerase Subfamily; Aldose Epimerase; Aldose Epimerase Or Galactose Mutarotase
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MQIKLSNKDQGIFVFQLDKSNYIKFCPERGGVITNWVSDGNEILYFDETRFMDKTKSIRGGIPILFPICGNLNTSSSVFG NGYLQLPQHGFARDLQWQYSFNENEKFLCLFLNASKQTKKYYPFDFELKIEVTLKINFLEFEITIHNKTDFAMPINFGLH PYFNISDFKNLEFVDNPLNCQDQERNTISNTLDELNKINLGVDLLMYTSGRSSFRDKIFKREVTLNHPYPFDLGVIWSDP PRRMICLEPWTSPRNSFVDGFRNIMIPSNDSKRLNSSIQIKSLK
Sequences:
>Translated_284_residues MQIKLSNKDQGIFVFQLDKSNYIKFCPERGGVITNWVSDGNEILYFDETRFMDKTKSIRGGIPILFPICGNLNTSSSVFG NGYLQLPQHGFARDLQWQYSFNENEKFLCLFLNASKQTKKYYPFDFELKIEVTLKINFLEFEITIHNKTDFAMPINFGLH PYFNISDFKNLEFVDNPLNCQDQERNTISNTLDELNKINLGVDLLMYTSGRSSFRDKIFKREVTLNHPYPFDLGVIWSDP PRRMICLEPWTSPRNSFVDGFRNIMIPSNDSKRLNSSIQIKSLK >Mature_284_residues MQIKLSNKDQGIFVFQLDKSNYIKFCPERGGVITNWVSDGNEILYFDETRFMDKTKSIRGGIPILFPICGNLNTSSSVFG NGYLQLPQHGFARDLQWQYSFNENEKFLCLFLNASKQTKKYYPFDFELKIEVTLKINFLEFEITIHNKTDFAMPINFGLH PYFNISDFKNLEFVDNPLNCQDQERNTISNTLDELNKINLGVDLLMYTSGRSSFRDKIFKREVTLNHPYPFDLGVIWSDP PRRMICLEPWTSPRNSFVDGFRNIMIPSNDSKRLNSSIQIKSLK
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323746, Length=176, Percent_Identity=26.7045454545455, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33130; Mature: 33130
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKLSNKDQGIFVFQLDKSNYIKFCPERGGVITNWVSDGNEILYFDETRFMDKTKSIRG CEEEECCCCCEEEEEEECCCCCEEECCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHCC GIPILFPICGNLNTSSSVFGNGYLQLPQHGFARDLQWQYSFNENEKFLCLFLNASKQTKK CCCEEEEECCCCCCCCEECCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCE YYPFDFELKIEVTLKINFLEFEITIHNKTDFAMPINFGLHPYFNISDFKNLEFVDNPLNC ECCCEEEEEEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCEECCCCCCCCEEECCCCCC QDQERNTISNTLDELNKINLGVDLLMYTSGRSSFRDKIFKREVTLNHPYPFDLGVIWSDP CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHEEEEECCCCCCEEEEEECCC PRRMICLEPWTSPRNSFVDGFRNIMIPSNDSKRLNSSIQIKSLK CCEEEEECCCCCCHHHHHHHHHEEEECCCCCHHCCCEEEEEECC >Mature Secondary Structure MQIKLSNKDQGIFVFQLDKSNYIKFCPERGGVITNWVSDGNEILYFDETRFMDKTKSIRG CEEEECCCCCEEEEEEECCCCCEEECCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHCC GIPILFPICGNLNTSSSVFGNGYLQLPQHGFARDLQWQYSFNENEKFLCLFLNASKQTKK CCCEEEEECCCCCCCCEECCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCE YYPFDFELKIEVTLKINFLEFEITIHNKTDFAMPINFGLHPYFNISDFKNLEFVDNPLNC ECCCEEEEEEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCEECCCCCCCCEEECCCCCC QDQERNTISNTLDELNKINLGVDLLMYTSGRSSFRDKIFKREVTLNHPYPFDLGVIWSDP CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHEEEEECCCCCCEEEEEECCC PRRMICLEPWTSPRNSFVDGFRNIMIPSNDSKRLNSSIQIKSLK CCEEEEECCCCCCHHHHHHHHHEEEECCCCCHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA