| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969338
Identifier: 123969338
GI number: 123969338
Start: 1538109
End: 1539458
Strand: Reverse
Name: 123969338
Synonym: A9601_18061
Alternate gene names: NA
Gene position: 1539458-1538109 (Counterclockwise)
Preceding gene: 123969339
Following gene: 123969336
Centisome position: 92.19
GC content: 27.78
Gene sequence:
>1350_bases ATGAAATTTGTCGTTATAGATGATGATCCCACAGGCTCTCAAACTGTTCACGATTGCTTATTACTGCTTAAGTGGGACTG CTCAACTTTAGTCAAAGGTTTTGAATCTAAATCTAATTTATTTTTTATTTTGGCTAACACAAGGTCACTATCTGAAAATG ATGCGAAATTAACAATAGAGGAAATTTGCAAAAATCTTAAGACTGTAATTACTTCTCAAGCCTATGAAGAAGAAATTATT TTTATAAGTAGAGGAGACTCTACTCTTCGCGGACATAACTATTTAGAGCCAATAGCTCTAAATAGTTGCATAGGTCCTTT TGATGCTACTTTTCATATTCCAGCTTTCATAGAGGGTAAAAGATTAACAATTAATGGATCTCATTTTGTTGATAAAACTC CTATTAGTCAAACAATTTTTGCAAAAGATAAAATTTTTGGATATGAGACAAGTAATGTCAAGAATCTTTTATTTCAGCAG AGTAAATCGCAAATAAATTTTGAAGATATTCAAAATCTTTTATTGTCAGATATCGAAATGCTAAATGATGAAGAAAATAA TATTGTTTTTAAAACACTAAAGAACTTGAAGAATAACAAACATGTAGTTGTAGATGTAGCAAATTATTCTCAACTCAAAA AATTTTCTTTAGTAATTAAAAAATTAATTAAACAAAAAAAATTCCTTTTTCGAACTGCAGCAAGTTTTATAAGTTCAATC TCTGAGAAAAAAAGTGTCTCTCAGAGTGAAATATTTTTCTCTAATTTAAGAATAAGAAATAAAGAAAAGAGTTTTCTTCC AGGATTGATAATTGTTGGATCTTATGTAGAACTTTCAACAATACAATTAAATAATTTATTAGAGATAAGTAATTGCAATC CAGTTGAATTAGATGTTTTTGAATTCTTTAAAATTACTTCATCAGATAATAATCAGAAGCGAAGGAATTTGTTTAAAAAT AAATTTTTGAAAGAAATTAGATTTTCTTTTGAGAAAGGAAAAACTCCTGTTTTGTTTACTTCAAGAAAATTTATGACTTT AGATGCTTCTGGACTATTTAATTTCTATAATTTACTTGCTTGTTTTATTGCTGAATTAGTCGCAGATTTGAAGTATGAAA TAGGATATTTGATTTCAAAAGGTGGAATAACAACAAATTTGATTCTTAGTAAAGGACTTAATGCAGATTATGTTTATCTT GAGGGACAGATTTTAACTGGCATTTCAGTGGTGACTTACAATCTAAAAAATGGCGAAAAACTTCCCATTGTTACTCATCC TGGAAACATTGGCACCAAAGATTCACTGGTTAGTATTTGGAAAGTTTTTGAAAATAAAAATAATTTTTAA
Upstream 100 bases:
>100_bases TTTGTTGATGGATTTAGAAACATTATGATTCCTTCAAATGATAGTAAAAGGTTAAATTCCTCAATACAAATAAAATCTCT TAAGTAATTTTGCAATACTT
Downstream 100 bases:
>100_bases AATTAGAAATTTGAGATAATTTCTTCAGCAAAACTGCTGCAGGATAAGGGTTCTACTTTTGGTTCCATTAAGCGTGCTAG ATCATAGGTGACTTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKFVVIDDDPTGSQTVHDCLLLLKWDCSTLVKGFESKSNLFFILANTRSLSENDAKLTIEEICKNLKTVITSQAYEEEII FISRGDSTLRGHNYLEPIALNSCIGPFDATFHIPAFIEGKRLTINGSHFVDKTPISQTIFAKDKIFGYETSNVKNLLFQQ SKSQINFEDIQNLLLSDIEMLNDEENNIVFKTLKNLKNNKHVVVDVANYSQLKKFSLVIKKLIKQKKFLFRTAASFISSI SEKKSVSQSEIFFSNLRIRNKEKSFLPGLIIVGSYVELSTIQLNNLLEISNCNPVELDVFEFFKITSSDNNQKRRNLFKN KFLKEIRFSFEKGKTPVLFTSRKFMTLDASGLFNFYNLLACFIAELVADLKYEIGYLISKGGITTNLILSKGLNADYVYL EGQILTGISVVTYNLKNGEKLPIVTHPGNIGTKDSLVSIWKVFENKNNF
Sequences:
>Translated_449_residues MKFVVIDDDPTGSQTVHDCLLLLKWDCSTLVKGFESKSNLFFILANTRSLSENDAKLTIEEICKNLKTVITSQAYEEEII FISRGDSTLRGHNYLEPIALNSCIGPFDATFHIPAFIEGKRLTINGSHFVDKTPISQTIFAKDKIFGYETSNVKNLLFQQ SKSQINFEDIQNLLLSDIEMLNDEENNIVFKTLKNLKNNKHVVVDVANYSQLKKFSLVIKKLIKQKKFLFRTAASFISSI SEKKSVSQSEIFFSNLRIRNKEKSFLPGLIIVGSYVELSTIQLNNLLEISNCNPVELDVFEFFKITSSDNNQKRRNLFKN KFLKEIRFSFEKGKTPVLFTSRKFMTLDASGLFNFYNLLACFIAELVADLKYEIGYLISKGGITTNLILSKGLNADYVYL EGQILTGISVVTYNLKNGEKLPIVTHPGNIGTKDSLVSIWKVFENKNNF >Mature_449_residues MKFVVIDDDPTGSQTVHDCLLLLKWDCSTLVKGFESKSNLFFILANTRSLSENDAKLTIEEICKNLKTVITSQAYEEEII FISRGDSTLRGHNYLEPIALNSCIGPFDATFHIPAFIEGKRLTINGSHFVDKTPISQTIFAKDKIFGYETSNVKNLLFQQ SKSQINFEDIQNLLLSDIEMLNDEENNIVFKTLKNLKNNKHVVVDVANYSQLKKFSLVIKKLIKQKKFLFRTAASFISSI SEKKSVSQSEIFFSNLRIRNKEKSFLPGLIIVGSYVELSTIQLNNLLEISNCNPVELDVFEFFKITSSDNNQKRRNLFKN KFLKEIRFSFEKGKTPVLFTSRKFMTLDASGLFNFYNLLACFIAELVADLKYEIGYLISKGGITTNLILSKGLNADYVYL EGQILTGISVVTYNLKNGEKLPIVTHPGNIGTKDSLVSIWKVFENKNNF
Specific function: Unknown
COG id: COG3395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51010; Mature: 51010
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVVIDDDPTGSQTVHDCLLLLKWDCSTLVKGFESKSNLFFILANTRSLSENDAKLTIE CEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEHH EICKNLKTVITSQAYEEEIIFISRGDSTLRGHNYLEPIALNSCIGPFDATFHIPAFIEGK HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCEECCEEEECC RLTINGSHFVDKTPISQTIFAKDKIFGYETSNVKNLLFQQSKSQINFEDIQNLLLSDIEM EEEECCCCCCCCCCCCCEEEEHHHEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LNDEENNIVFKTLKNLKNNKHVVVDVANYSQLKKFSLVIKKLIKQKKFLFRTAASFISSI HCCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEKKSVSQSEIFFSNLRIRNKEKSFLPGLIIVGSYVELSTIQLNNLLEISNCNPVELDVF HHHHCCCHHHHHHHHCEEECCCCCCCCCEEEEECCEEEEEEEECCEEEECCCCCCEEEHH EFFKITSSDNNQKRRNLFKNKFLKEIRFSFEKGKTPVLFTSRKFMTLDASGLFNFYNLLA HEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECHHHHHHHHHHH CFIAELVADLKYEIGYLISKGGITTNLILSKGLNADYVYLEGQILTGISVVTYNLKNGEK HHHHHHHHHHHHHHCEEEECCCCEEEEHHHCCCCCCEEEEECEEEECEEEEEEECCCCCE LPIVTHPGNIGTKDSLVSIWKVFENKNNF EEEEECCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKFVVIDDDPTGSQTVHDCLLLLKWDCSTLVKGFESKSNLFFILANTRSLSENDAKLTIE CEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEHH EICKNLKTVITSQAYEEEIIFISRGDSTLRGHNYLEPIALNSCIGPFDATFHIPAFIEGK HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCEECCEEEECC RLTINGSHFVDKTPISQTIFAKDKIFGYETSNVKNLLFQQSKSQINFEDIQNLLLSDIEM EEEECCCCCCCCCCCCCEEEEHHHEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LNDEENNIVFKTLKNLKNNKHVVVDVANYSQLKKFSLVIKKLIKQKKFLFRTAASFISSI HCCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEKKSVSQSEIFFSNLRIRNKEKSFLPGLIIVGSYVELSTIQLNNLLEISNCNPVELDVF HHHHCCCHHHHHHHHCEEECCCCCCCCCEEEEECCEEEEEEEECCEEEECCCCCCEEEHH EFFKITSSDNNQKRRNLFKNKFLKEIRFSFEKGKTPVLFTSRKFMTLDASGLFNFYNLLA HEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECHHHHHHHHHHH CFIAELVADLKYEIGYLISKGGITTNLILSKGLNADYVYLEGQILTGISVVTYNLKNGEK HHHHHHHHHHHHHHCEEEECCCCEEEEHHHCCCCCCEEEEECEEEECEEEEEEECCCCCE LPIVTHPGNIGTKDSLVSIWKVFENKNNF EEEEECCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA