| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is thiF [H]
Identifier: 123969308
GI number: 123969308
Start: 1508150
End: 1509295
Strand: Direct
Name: thiF [H]
Synonym: A9601_17761
Alternate gene names: 123969308
Gene position: 1508150-1509295 (Clockwise)
Preceding gene: 123969306
Following gene: 123969310
Centisome position: 90.31
GC content: 30.37
Gene sequence:
>1146_bases ATGTCCAAAGATATAAAATTTAATTTCTTAAACTCTGATGAAGAAGAGAGATACCAAAAACATCTTACCCTTAAAGAGAT AGGTTACGAGGGCCAATTAAATCTTAAAAACAGCTCAGTATTATGTATCGGAGCAGGTGGGCTTGGCTCTTCCGTTTTGC TTTATCTAGCTGCAACAGGAATTGGGAGAATTGGAATAGTTGATAACGATCAAGTTGAAAAGTCTAATCTCCAGAGACAG ATAATTCATGAAACAAATACTATTGGCAATCTTAAAATTGATTCTGCTAGGGAAAGAATTAAAAATTTCAATCCTAATTG TGAAATATTAACCTTTTCAGAGAGAATTAATCCTAAAAATGCTCTTGAATTAATAAAGGAGTTTGATGTTATTTGTGATT GCTCTGATAACTTTGGCACAAGATATTTAATAAATGATTCATGCCTGATATTAGATAAACCCCTAGTCTTTGGAAGTGTA CAAGGCTTTGAAGGGCAGGTGAGTGTTTTCAATTTATATAAAAATAGTCCAAATTTAAGAGACTTACTTCCAGAATCACC TTCAAAAAATGCTGCCCCAAGTTGTGCAGAATTCGGAGTTGTGGGTGTTTCAACAGGTTTAATAGGAATTCTTCAGGTTA ATGAAATTATCAAAATCATTTTGAAAAAAGGTGAAATTTTAGATGGGAAGATTTTAATTTTTGATCTATTGAATATGAAT ATGAAAAAATTACATCTAAAAAGTGATCAGTCAAATAAACGAATAAAAAACCTGTCTCAGTTTGAGGGCTTTTATAATAG CGACGAATATTGTGAAAAAAATAATGAGATTAACATTATAAATGCTGATGAATTTAATAGTTTATACAAAGCAAAACCCA ACAAAATTCTTTTAATTGATGTTAGAGAAAATGAAGAATTTTCTTCATTTGCAATAGAAGGATCTATCTCAATTCCCTTA AGTCATTTGAAACAAGCATCTGACTTAAAATTTATTCAAAAAGAAAGTTTAAATAAAGAGGTTTTCACTATATGTAAATC GGGGAAACGCTCTGAAAAAGCATCAAGAATCTTATCTAAATTCAAAATTAAGTCAAGATCTATTGAAGGCGGCATCGAAA AGGTAAAAAAAATATTGGGCAATTAA
Upstream 100 bases:
>100_bases CATTAATAAATTAGATCAAAAAGAAATTTTAAAAAGTCTAAAATTTTTATTTTAATTATTATATTTTCATAGTTTAGCTC GCAAAAATTAAAGGATCTCA
Downstream 100 bases:
>100_bases TTTTTTAAGAATAGTTAGTAATCTACACCTCTTTTTAAATCAACTCCCACATTTGCATAATGCTTATGACAAACCATTTC AGAGTAAACATCAGCCAGTT
Product: molybdopterin biosynthesis protein
Products: NA
Alternate protein names: Sulfur carrier protein CysO adenylyltransferase; Sulfur carrier protein CysO sulfurtransferase [H]
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSKDIKFNFLNSDEEERYQKHLTLKEIGYEGQLNLKNSSVLCIGAGGLGSSVLLYLAATGIGRIGIVDNDQVEKSNLQRQ IIHETNTIGNLKIDSARERIKNFNPNCEILTFSERINPKNALELIKEFDVICDCSDNFGTRYLINDSCLILDKPLVFGSV QGFEGQVSVFNLYKNSPNLRDLLPESPSKNAAPSCAEFGVVGVSTGLIGILQVNEIIKIILKKGEILDGKILIFDLLNMN MKKLHLKSDQSNKRIKNLSQFEGFYNSDEYCEKNNEINIINADEFNSLYKAKPNKILLIDVRENEEFSSFAIEGSISIPL SHLKQASDLKFIQKESLNKEVFTICKSGKRSEKASRILSKFKIKSRSIEGGIEKVKKILGN
Sequences:
>Translated_381_residues MSKDIKFNFLNSDEEERYQKHLTLKEIGYEGQLNLKNSSVLCIGAGGLGSSVLLYLAATGIGRIGIVDNDQVEKSNLQRQ IIHETNTIGNLKIDSARERIKNFNPNCEILTFSERINPKNALELIKEFDVICDCSDNFGTRYLINDSCLILDKPLVFGSV QGFEGQVSVFNLYKNSPNLRDLLPESPSKNAAPSCAEFGVVGVSTGLIGILQVNEIIKIILKKGEILDGKILIFDLLNMN MKKLHLKSDQSNKRIKNLSQFEGFYNSDEYCEKNNEINIINADEFNSLYKAKPNKILLIDVRENEEFSSFAIEGSISIPL SHLKQASDLKFIQKESLNKEVFTICKSGKRSEKASRILSKFKIKSRSIEGGIEKVKKILGN >Mature_380_residues SKDIKFNFLNSDEEERYQKHLTLKEIGYEGQLNLKNSSVLCIGAGGLGSSVLLYLAATGIGRIGIVDNDQVEKSNLQRQI IHETNTIGNLKIDSARERIKNFNPNCEILTFSERINPKNALELIKEFDVICDCSDNFGTRYLINDSCLILDKPLVFGSVQ GFEGQVSVFNLYKNSPNLRDLLPESPSKNAAPSCAEFGVVGVSTGLIGILQVNEIIKIILKKGEILDGKILIFDLLNMNM KKLHLKSDQSNKRIKNLSQFEGFYNSDEYCEKNNEINIINADEFNSLYKAKPNKILLIDVRENEEFSSFAIEGSISIPLS HLKQASDLKFIQKESLNKEVFTICKSGKRSEKASRILSKFKIKSRSIEGGIEKVKKILGN
Specific function: Catalyzes the conversion of the sulfur carrier protein CysO to CysO-thiocarboxylate. The reaction is thought to proceed in two steps:first, ATP-dependent activation of CysO as acyl- adenylate (CysO-COOAMP), followed by sulfur transfer to give CysO- thioca
COG id: COG0476
COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI7657339, Length=395, Percent_Identity=34.6835443037975, Blast_Score=212, Evalue=4e-55, Organism=Homo sapiens, GI4885649, Length=163, Percent_Identity=30.6748466257669, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI23510338, Length=164, Percent_Identity=26.219512195122, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI23510340, Length=164, Percent_Identity=26.219512195122, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI38045942, Length=150, Percent_Identity=32, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI38045944, Length=150, Percent_Identity=32, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1787048, Length=237, Percent_Identity=35.4430379746835, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI87082356, Length=240, Percent_Identity=35, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1789177, Length=191, Percent_Identity=28.2722513089005, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17540406, Length=392, Percent_Identity=32.1428571428571, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI193203301, Length=135, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321903, Length=391, Percent_Identity=33.2480818414322, Blast_Score=202, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6325438, Length=160, Percent_Identity=28.125, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6320598, Length=141, Percent_Identity=30.4964539007092, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322639, Length=193, Percent_Identity=26.4248704663212, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24582879, Length=393, Percent_Identity=36.8956743002545, Blast_Score=253, Evalue=1e-67, Organism=Drosophila melanogaster, GI24660640, Length=137, Percent_Identity=34.3065693430657, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007901 - InterPro: IPR009036 - InterPro: IPR016040 - InterPro: IPR001763 - InterPro: IPR000594 [H]
Pfam domain/function: PF05237 MoeZ_MoeB; PF00581 Rhodanese; PF00899 ThiF [H]
EC number: NA
Molecular weight: Translated: 42725; Mature: 42593
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDIKFNFLNSDEEERYQKHLTLKEIGYEGQLNLKNSSVLCIGAGGLGSSVLLYLAATG CCCCEEEEECCCCHHHHHHHHCHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCC IGRIGIVDNDQVEKSNLQRQIIHETNTIGNLKIDSARERIKNFNPNCEILTFSERINPKN CCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCHHH ALELIKEFDVICDCSDNFGTRYLINDSCLILDKPLVFGSVQGFEGQVSVFNLYKNSPNLR HHHHHHHCCEEEECCCCCCCEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCHH DLLPESPSKNAAPSCAEFGVVGVSTGLIGILQVNEIIKIILKKGEILDGKILIFDLLNMN HHCCCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCC MKKLHLKSDQSNKRIKNLSQFEGFYNSDEYCEKNNEINIINADEFNSLYKAKPNKILLID EEEEEECCCCCHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECHHHHHHHHCCCCEEEEEE VRENEEFSSFAIEGSISIPLSHLKQASDLKFIQKESLNKEVFTICKSGKRSEKASRILSK ECCCCCCCEEEEECEEECCHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH FKIKSRSIEGGIEKVKKILGN HHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure SKDIKFNFLNSDEEERYQKHLTLKEIGYEGQLNLKNSSVLCIGAGGLGSSVLLYLAATG CCCEEEEECCCCHHHHHHHHCHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCC IGRIGIVDNDQVEKSNLQRQIIHETNTIGNLKIDSARERIKNFNPNCEILTFSERINPKN CCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCHHH ALELIKEFDVICDCSDNFGTRYLINDSCLILDKPLVFGSVQGFEGQVSVFNLYKNSPNLR HHHHHHHCCEEEECCCCCCCEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCHH DLLPESPSKNAAPSCAEFGVVGVSTGLIGILQVNEIIKIILKKGEILDGKILIFDLLNMN HHCCCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCC MKKLHLKSDQSNKRIKNLSQFEGFYNSDEYCEKNNEINIINADEFNSLYKAKPNKILLID EEEEEECCCCCHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECHHHHHHHHCCCCEEEEEE VRENEEFSSFAIEGSISIPLSHLKQASDLKFIQKESLNKEVFTICKSGKRSEKASRILSK ECCCCCCCEEEEECEEECCHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH FKIKSRSIEGGIEKVKKILGN HHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]