Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is tyrA [H]

Identifier: 123969304

GI number: 123969304

Start: 1504264

End: 1505103

Strand: Direct

Name: tyrA [H]

Synonym: A9601_17721

Alternate gene names: 123969304

Gene position: 1504264-1505103 (Clockwise)

Preceding gene: 123969301

Following gene: 123969306

Centisome position: 90.08

GC content: 30.95

Gene sequence:

>840_bases
ATGAAAATTGGAATAGTAGGATTAGGTTTAATTGGCGGTTCTTTGGGATTAAAACTCCAAAGTCTAAATCATACAATTTA
TGGAATAGCAAATAATGAATTTAATGAAAAAAAAGCTAAGGATAAAAAACTTGCAAATTTTGTTAGCTGTGATTTGAGCC
TATTAAAAAAATGTGAGCTAATAATTTTGGCATTGCCTATCAAAGATTTGATCAGTCCGTCTCAACAATTAGTCGCATCA
ATACCTCAGGAAACAATAATAACTGATGTAGGCTCTGTAAAAGAACCAATTGTAAATACATGGGAAAATTTGCATCCTCT
ATTTATTGGATCTCATCCAATGGCAGGAACAGAAAAAAAAGGAGTTGATTCAGGTTTTGAAGGTCTTTTTAAAAATGCAA
AATGGATTATTACCCCAACACAAAATAGTGATTTAAATTCAGTCAGAACTATTTCCGAGCTCATAAAATCAATGCATTGT
GAAATTTGCCAAGCTTCGCCAAAAGAGCATGATGAAGCAGTATCTCTAATTTCTCATTTGCCTATATTTTTAGCTTCTGC
CCTGATAGAAACTGCGCAAACAAAAAATAATCAATCTTTATTAGATCTCACGCAAAAATTAGCTGCTACAGGATTTGCTG
ATACTTCGAGAGTTGGCGGAGGCAATGAACAACTAGGTCTAGATTTAGCTATTAATAATCAGATTAATATTCTAAATTCC
ATAAATAATTTTAAAAATAAGCTAAACATACTGGAATCTCTTATTAAAGAAAAAAATTGGGATTTACTTTCTAAAAAACT
TGCTGAAGCAAAAGAAAACAGACAAAATTTTATAAACTAA

Upstream 100 bases:

>100_bases
AGCATTTATAATTAATTTAATTTCAAATACATACAAAATTTATGAACCTAATATACAAAAAATTGGTATCAATATAAGAG
GGTCTTGAATTAATCAATCT

Downstream 100 bases:

>100_bases
AATTTTTTACACCTTTGGAAGCTAAAATTTGCCTTGAAACCATTAATGCAGACTGACTAACACCTGCAGTCCCCTCTCCT
GGATAAATCGAATCTCCACA

Product: arogenate dehydrogenase

Products: NA

Alternate protein names: PDH [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKIGIVGLGLIGGSLGLKLQSLNHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCELIILALPIKDLISPSQQLVAS
IPQETIITDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKKGVDSGFEGLFKNAKWIITPTQNSDLNSVRTISELIKSMHC
EICQASPKEHDEAVSLISHLPIFLASALIETAQTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINILNS
INNFKNKLNILESLIKEKNWDLLSKKLAEAKENRQNFIN

Sequences:

>Translated_279_residues
MKIGIVGLGLIGGSLGLKLQSLNHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCELIILALPIKDLISPSQQLVAS
IPQETIITDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKKGVDSGFEGLFKNAKWIITPTQNSDLNSVRTISELIKSMHC
EICQASPKEHDEAVSLISHLPIFLASALIETAQTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINILNS
INNFKNKLNILESLIKEKNWDLLSKKLAEAKENRQNFIN
>Mature_279_residues
MKIGIVGLGLIGGSLGLKLQSLNHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCELIILALPIKDLISPSQQLVAS
IPQETIITDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKKGVDSGFEGLFKNAKWIITPTQNSDLNSVRTISELIKSMHC
EICQASPKEHDEAVSLISHLPIFLASALIETAQTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINILNS
INNFKNKLNILESLIKEKNWDLLSKKLAEAKENRQNFIN

Specific function: Unknown

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR002912
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF01842 ACT; PF02153 PDH [H]

EC number: =1.3.1.12 [H]

Molecular weight: Translated: 30546; Mature: 30546

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIVGLGLIGGSLGLKLQSLNHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCEL
CEEEEEEHHHHCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCE
IILALPIKDLISPSQQLVASIPQETIITDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKK
EEEEECHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
GVDSGFEGLFKNAKWIITPTQNSDLNSVRTISELIKSMHCEICQASPKEHDEAVSLISHL
CCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
PIFLASALIETAQTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINILNS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHH
INNFKNKLNILESLIKEKNWDLLSKKLAEAKENRQNFIN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIGIVGLGLIGGSLGLKLQSLNHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCEL
CEEEEEEHHHHCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCE
IILALPIKDLISPSQQLVASIPQETIITDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKK
EEEEECHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
GVDSGFEGLFKNAKWIITPTQNSDLNSVRTISELIKSMHCEICQASPKEHDEAVSLISHL
CCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
PIFLASALIETAQTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINILNS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHH
INNFKNKLNILESLIKEKNWDLLSKKLAEAKENRQNFIN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3106153; 9384377 [H]