Click here to switch to the map view.

The map label for this gene is atpH [H]

Identifier: 123969186

GI number: 123969186

Start: 1398795

End: 1399337

Strand: Reverse

Name: atpH [H]

Synonym: A9601_16541

Alternate gene names: 123969186

Gene position: 1399337-1398795 (Counterclockwise)

Preceding gene: 123969187

Following gene: 123969185

Centisome position: 83.8

GC content: 34.81

Gene sequence:

>543_bases
ATGCCACTTTTAAATTCAGTTACTACACCATACGCAGAGGCATTACTTCAAGTTGTGAATGAAAATTCACAAACTGAAGA
GATGGTTTCTGAGGTTAAACAACTCTTAGAATTAGTAAATGATTCCCCCGAATTGGAGAAGGCACTATCCTCTCCCATTC
TAGAGACCGATGCTAAGAAGAAAATCATTATTGAAATTTTTTCAAATAAGGTTAATTCTTCTTTACTGAATTTCTTAAAA
TTATTGGCCGATAGGCAAAGAATTGGAATCCTTACCTCAATTCTTGATAGGTTTTTAGAGATTTACCGAGAAAATAGTAA
TATTGCTTTGGCAACTGTTACTTCTGCAGTCGAGCTTACTGATGAACAGAAAGGTTTAATCACCAAAAAGATCATCAATA
TTGCTGGAACAGAAAAATTAGAACTTGTAACTAAAATCGACCCATCTCTTATTGGTGGTTTCGTCGCCAGTGTAGGATCA
AAAGTAATTGATGCTTCCCTTGCTTCACAAATTAGAAAACTTGGCTTAACTCTTTCCAAGTAA

Upstream 100 bases:

>100_bases
TGGCAATTAAGAAAGCTTTAGATTCTCTACCAAATCGACTTGATAAAACAACACAAGAAAATTTGGTTACTCAATCAATT
AATAATATTGAGGTGAACTA

Downstream 100 bases:

>100_bases
CTTTTAAATCAACCTTAAATTCTTAAAATCCATGGTATCTATACGCCCTGATGAAATCAGTTCAATCTTAAAACAACAAA
TAACTGATTATGACCAATCT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPLLNSVTTPYAEALLQVVNENSQTEEMVSEVKQLLELVNDSPELEKALSSPILETDAKKKIIIEIFSNKVNSSLLNFLK
LLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGS
KVIDASLASQIRKLGLTLSK

Sequences:

>Translated_180_residues
MPLLNSVTTPYAEALLQVVNENSQTEEMVSEVKQLLELVNDSPELEKALSSPILETDAKKKIIIEIFSNKVNSSLLNFLK
LLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGS
KVIDASLASQIRKLGLTLSK
>Mature_179_residues
PLLNSVTTPYAEALLQVVNENSQTEEMVSEVKQLLELVNDSPELEKALSSPILETDAKKKIIIEIFSNKVNSSLLNFLKL
LADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGSK
VIDASLASQIRKLGLTLSK

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Caenorhabditis elegans, GI71984710, Length=173, Percent_Identity=27.7456647398844, Blast_Score=73, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71984717, Length=173, Percent_Identity=27.7456647398844, Blast_Score=73, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6320504, Length=179, Percent_Identity=27.9329608938547, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19693; Mature: 19562

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLNSVTTPYAEALLQVVNENSQTEEMVSEVKQLLELVNDSPELEKALSSPILETDAKK
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHH
KIIIEIFSNKVNSSLLNFLKLLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHC
DEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGSKVIDASLASQIRKLGLTLSK
CHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PLLNSVTTPYAEALLQVVNENSQTEEMVSEVKQLLELVNDSPELEKALSSPILETDAKK
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHH
KIIIEIFSNKVNSSLLNFLKLLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHC
DEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGSKVIDASLASQIRKLGLTLSK
CHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA