| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969181
Identifier: 123969181
GI number: 123969181
Start: 1394656
End: 1395717
Strand: Reverse
Name: 123969181
Synonym: A9601_16491
Alternate gene names: NA
Gene position: 1395717-1394656 (Counterclockwise)
Preceding gene: 123969182
Following gene: 123969176
Centisome position: 83.58
GC content: 33.9
Gene sequence:
>1062_bases ATGGAAAATTCACCAACAATATTCATTGTTCCAACTGGCATTGGTTGTGAAATAGGAGGTTTTGCTGGGGATGCGCTTCC TACCGCTAAATTATTAGCATCGGCAAGTGGATGTTTGATTACTCATCCAAATGTTATGAATGGCGGCACTCTTTCTGAAA AAGATAAAAATATTTTTTATGTTGAGGGTTATAGTTTAGACCGACTTGCTAAAGGAGAAATCGCTTTAAAAAGGGTAAAG CAACAGAAAATTGGAATAATTTTTGATTCAGCCATTGAAAAAGAAATATTATTAAGACATTTACAAGTTGCTGATGCATG TGTTTCTACTTTAGGGATTAATGTTCATTCTTATGTGATTACAAAAAAGCCATTAAACATAGTTATTGATTCTGATTCTT CAAAAATCAGTGGTGGCATAATTGAAAATCCTGATACTCTAATTGATGCTGCAAAATGTTTAATAGAAAAAGGAGTGACG GCAATAGCAATTGTGGCAAAATTTCCAGATGATTCAGATTCTTTAGAGACAAATATATATCGAGAGGGGAAAGGGGTTGA TCCTATTTCTGGGGTCGAAGCAGTTATCAGTCATTTAATAAGCAAATTTTTAAAAGTTCCTTGTGCTCACGCACCGGCTT TAAATCCAATTGAATTGAATGAAAAATTAGATCCTCGTGCAGCTGCAGAAGAAATAGGATACACCTTTTTACCATCAGTA CTAATTGGGTTGAGCAATGCACCTGACATTGTTGAATTGCCCTTTAAAAATAAATCAATCTCACTACACCCTGATCAGAT TGAATCTATTGTTGTTCCTAATGGGGCACTAGGTGGAGAAGCAGTACTAGCTGGGATTGAAAAAGGTTTAAATATTATCT CTGTAAAAAATCAAAATACATTAAAAGTGATAAATGAGTTTTATGATTATCCCAATCTTTATGAAGTGGATAATTATTTA GAGGCTGCAGGCATAATTCTTGCTATCAAAAAAGGTATCAACCTTGATTCAGTTAAACGGCCTTTAAAAAAAATCCAACA GTATTCCTATAGTGATCAATAA
Upstream 100 bases:
>100_bases TGTTGATATTCAAAATTCTATTGACTCTTTTGGAATGAAAAAACTTAAAATTAAAGCTGTCTTAGCTAATTAAAAAATAA AAATTTAAATATTTTTAATA
Downstream 100 bases:
>100_bases GATATTGCTATGGGAACTCTCCAGTCACTTCCTAATGATTGACTGCTTAGTTTTAGGATTGGAGGAGCCTGCTTTCTTTT GAATTCCGCTTTTTTTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MENSPTIFIVPTGIGCEIGGFAGDALPTAKLLASASGCLITHPNVMNGGTLSEKDKNIFYVEGYSLDRLAKGEIALKRVK QQKIGIIFDSAIEKEILLRHLQVADACVSTLGINVHSYVITKKPLNIVIDSDSSKISGGIIENPDTLIDAAKCLIEKGVT AIAIVAKFPDDSDSLETNIYREGKGVDPISGVEAVISHLISKFLKVPCAHAPALNPIELNEKLDPRAAAEEIGYTFLPSV LIGLSNAPDIVELPFKNKSISLHPDQIESIVVPNGALGGEAVLAGIEKGLNIISVKNQNTLKVINEFYDYPNLYEVDNYL EAAGIILAIKKGINLDSVKRPLKKIQQYSYSDQ
Sequences:
>Translated_353_residues MENSPTIFIVPTGIGCEIGGFAGDALPTAKLLASASGCLITHPNVMNGGTLSEKDKNIFYVEGYSLDRLAKGEIALKRVK QQKIGIIFDSAIEKEILLRHLQVADACVSTLGINVHSYVITKKPLNIVIDSDSSKISGGIIENPDTLIDAAKCLIEKGVT AIAIVAKFPDDSDSLETNIYREGKGVDPISGVEAVISHLISKFLKVPCAHAPALNPIELNEKLDPRAAAEEIGYTFLPSV LIGLSNAPDIVELPFKNKSISLHPDQIESIVVPNGALGGEAVLAGIEKGLNIISVKNQNTLKVINEFYDYPNLYEVDNYL EAAGIILAIKKGINLDSVKRPLKKIQQYSYSDQ >Mature_353_residues MENSPTIFIVPTGIGCEIGGFAGDALPTAKLLASASGCLITHPNVMNGGTLSEKDKNIFYVEGYSLDRLAKGEIALKRVK QQKIGIIFDSAIEKEILLRHLQVADACVSTLGINVHSYVITKKPLNIVIDSDSSKISGGIIENPDTLIDAAKCLIEKGVT AIAIVAKFPDDSDSLETNIYREGKGVDPISGVEAVISHLISKFLKVPCAHAPALNPIELNEKLDPRAAAEEIGYTFLPSV LIGLSNAPDIVELPFKNKSISLHPDQIESIVVPNGALGGEAVLAGIEKGLNIISVKNQNTLKVINEFYDYPNLYEVDNYL EAAGIILAIKKGINLDSVKRPLKKIQQYSYSDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021763 [H]
Pfam domain/function: PF11805 DUF3326 [H]
EC number: NA
Molecular weight: Translated: 37973; Mature: 37973
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSPTIFIVPTGIGCEIGGFAGDALPTAKLLASASGCLITHPNVMNGGTLSEKDKNIFY CCCCCEEEEEECCCCCEECCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEE VEGYSLDRLAKGEIALKRVKQQKIGIIFDSAIEKEILLRHLQVADACVSTLGINVHSYVI EECCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE TKKPLNIVIDSDSSKISGGIIENPDTLIDAAKCLIEKGVTAIAIVAKFPDDSDSLETNIY EECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHEE REGKGVDPISGVEAVISHLISKFLKVPCAHAPALNPIELNEKLDPRAAAEEIGYTFLPSV ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHCCHHHHHHH LIGLSNAPDIVELPFKNKSISLHPDQIESIVVPNGALGGEAVLAGIEKGLNIISVKNQNT HHCCCCCCCEEECCCCCCCEEECHHHHCEEECCCCCCCHHHHHHHHHHCCEEEEECCCCH LKVINEFYDYPNLYEVDNYLEAAGIILAIKKGINLDSVKRPLKKIQQYSYSDQ HHHHHHHHCCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MENSPTIFIVPTGIGCEIGGFAGDALPTAKLLASASGCLITHPNVMNGGTLSEKDKNIFY CCCCCEEEEEECCCCCEECCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEE VEGYSLDRLAKGEIALKRVKQQKIGIIFDSAIEKEILLRHLQVADACVSTLGINVHSYVI EECCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE TKKPLNIVIDSDSSKISGGIIENPDTLIDAAKCLIEKGVTAIAIVAKFPDDSDSLETNIY EECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHEE REGKGVDPISGVEAVISHLISKFLKVPCAHAPALNPIELNEKLDPRAAAEEIGYTFLPSV ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHCCHHHHHHH LIGLSNAPDIVELPFKNKSISLHPDQIESIVVPNGALGGEAVLAGIEKGLNIISVKNQNT HHCCCCCCCEEECCCCCCCEEECHHHHCEEECCCCCCCHHHHHHHHHHCCEEEEECCCCH LKVINEFYDYPNLYEVDNYLEAAGIILAIKKGINLDSVKRPLKKIQQYSYSDQ HHHHHHHHCCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3041005 [H]