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The map label for this gene is phrA [H]

Identifier: 123969094

GI number: 123969094

Start: 1337981

End: 1339135

Strand: Reverse

Name: phrA [H]

Synonym: A9601_15621

Alternate gene names: 123969094

Gene position: 1339135-1337981 (Counterclockwise)

Preceding gene: 123969097

Following gene: 123969093

Centisome position: 80.19

GC content: 26.75

Gene sequence:

>1155_bases
ATGTCATTTTTATTAAAAGCACAAAATACCTGGGAAAATTTTGCGAAATACAAAATTAATGATTATGCAAAATTAAGAAA
TTTTGATTTTGGGCCAAATAACGAAAGTTCAGTTTCAAAATTATCGCCTTTCATTACTCATAGAATATTATCGGAATATG
ATCTGATCCATGATATTAAAAGTAAGTACAAAATCAAAAATTCAACTAAATTTGTTGAAGAAATATTTTGGAGAGTTTAC
TGGAAAGGGTGGATGGAAAATAGACCTAAAGTTTGGAGAAATTTTATTTCAGAAAATAATCTCGATTTTGATTATGAGCT
ATATGAAAATGCAATTAATGGCAATACAGAATTAGATTTTTTTAATTCTTGGGTTCATGAATTAAAGCAGTACAACTATT
TGCATAATCATACAAGAATGTGGTTTGCGAGTACTTGGATATTTAATTTAGGCCTCCCATGGCAATTAGGAGCAAAGTTT
TTCTTTAAATATCTTTTTGATGGAGATGCTTCATCTAATCTCCTTAGCTGGAGATGGGTTGGAGGATTGCAAACGAAGGG
AAAACAATATCTTTTTTCATCATCAAACCTCAGAAAGTTTTCTAATAATAGATTTAATGTGGAAAAAATAAGTAATCAAC
AAATTTTTCTTGAAGAATCTAATCAAATACCATTTGAAGATGAGATTTATAAAAATGATATGGATCCTAAATCAGATAAT
CTGATTATGTTTGAAAATGATCTGCACCTTGCAACTCTTAAAAATTTACTTCCAAGCTATAAAAAAGTATTTATTATCCT
TTTAAAAAATGAACAAAGACAAATTAAATTGTCTGAATCTGTTTTGAAATTTAAACAAGATTTGGTCTCTGAATTTGTAG
AGCAATTTGATAATGTTAAACAGATTGATCCTTATTCACTGGAAAATACTTTTAAAAATACCAATGAAATAGACATTATT
TATCCTGGAGTGGGAGAAAATTATGATTTCATAACTGAGTTTAAAAATTTACACCATAAAGAAATTTTTAATCTTGTGAG
GGATGAAGATTTATTTGCTTGGAAATTTGCTAAAAGAGGGTTTTTTAAATTTAAAGAAAATATTCCAAAAATAAATCAGA
GAATATTAGAAAATTTTTCAAAAAACAATTTTTAA

Upstream 100 bases:

>100_bases
ATTTACAAAAAGTGAAATAGAAAATTTTAAGGATTAATTTGCAGGCAAATTTTTGAAATTTCTATCAATACAAAAAAAAA
TTTTTTAAAGTTATGAGAAA

Downstream 100 bases:

>100_bases
CTTAATTGAATTCCTAATCAGAAAATAACCCTTTTGGTAAGTAAGTATAAATACTTATTTAGGTATGACTTTTGCTCTTT
AATCCACGATGGATACTGTG

Product: DNA photolyase-like protein

Products: NA

Alternate protein names: DNA photolyase; Photoreactivating enzyme [H]

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MSFLLKAQNTWENFAKYKINDYAKLRNFDFGPNNESSVSKLSPFITHRILSEYDLIHDIKSKYKIKNSTKFVEEIFWRVY
WKGWMENRPKVWRNFISENNLDFDYELYENAINGNTELDFFNSWVHELKQYNYLHNHTRMWFASTWIFNLGLPWQLGAKF
FFKYLFDGDASSNLLSWRWVGGLQTKGKQYLFSSSNLRKFSNNRFNVEKISNQQIFLEESNQIPFEDEIYKNDMDPKSDN
LIMFENDLHLATLKNLLPSYKKVFIILLKNEQRQIKLSESVLKFKQDLVSEFVEQFDNVKQIDPYSLENTFKNTNEIDII
YPGVGENYDFITEFKNLHHKEIFNLVRDEDLFAWKFAKRGFFKFKENIPKINQRILENFSKNNF

Sequences:

>Translated_384_residues
MSFLLKAQNTWENFAKYKINDYAKLRNFDFGPNNESSVSKLSPFITHRILSEYDLIHDIKSKYKIKNSTKFVEEIFWRVY
WKGWMENRPKVWRNFISENNLDFDYELYENAINGNTELDFFNSWVHELKQYNYLHNHTRMWFASTWIFNLGLPWQLGAKF
FFKYLFDGDASSNLLSWRWVGGLQTKGKQYLFSSSNLRKFSNNRFNVEKISNQQIFLEESNQIPFEDEIYKNDMDPKSDN
LIMFENDLHLATLKNLLPSYKKVFIILLKNEQRQIKLSESVLKFKQDLVSEFVEQFDNVKQIDPYSLENTFKNTNEIDII
YPGVGENYDFITEFKNLHHKEIFNLVRDEDLFAWKFAKRGFFKFKENIPKINQRILENFSKNNF
>Mature_383_residues
SFLLKAQNTWENFAKYKINDYAKLRNFDFGPNNESSVSKLSPFITHRILSEYDLIHDIKSKYKIKNSTKFVEEIFWRVYW
KGWMENRPKVWRNFISENNLDFDYELYENAINGNTELDFFNSWVHELKQYNYLHNHTRMWFASTWIFNLGLPWQLGAKFF
FKYLFDGDASSNLLSWRWVGGLQTKGKQYLFSSSNLRKFSNNRFNVEKISNQQIFLEESNQIPFEDEIYKNDMDPKSDNL
IMFENDLHLATLKNLLPSYKKVFIILLKNEQRQIKLSESVLKFKQDLVSEFVEQFDNVKQIDPYSLENTFKNTNEIDIIY
PGVGENYDFITEFKNLHHKEIFNLVRDEDLFAWKFAKRGFFKFKENIPKINQRILENFSKNNF

Specific function: Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutyl pyrimidine dimers (in cis-syn configuration), which are formed between adjacent bases on the same DNA strand upon exposure to ul

COG id: COG0415

COG function: function code L; Deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DNA photolyase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002081
- InterPro:   IPR018394
- InterPro:   IPR006050
- InterPro:   IPR005101
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00875 DNA_photolyase; PF03441 FAD_binding_7 [H]

EC number: =4.1.99.3 [H]

Molecular weight: Translated: 46318; Mature: 46187

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLLKAQNTWENFAKYKINDYAKLRNFDFGPNNESSVSKLSPFITHRILSEYDLIHDIK
CCEEEECCHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SKYKIKNSTKFVEEIFWRVYWKGWMENRPKVWRNFISENNLDFDYELYENAINGNTELDF
HHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHH
FNSWVHELKQYNYLHNHTRMWFASTWIFNLGLPWQLGAKFFFKYLFDGDASSNLLSWRWV
HHHHHHHHHHHHHHHHCHHHEEEEEEHEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEC
GGLQTKGKQYLFSSSNLRKFSNNRFNVEKISNQQIFLEESNQIPFEDEIYKNDMDPKSDN
CCCCCCCCCEEECCCCHHHHCCCCEEEEECCCCEEEEECCCCCCCCHHHHCCCCCCCCCC
LIMFENDLHLATLKNLLPSYKKVFIILLKNEQRQIKLSESVLKFKQDLVSEFVEQFDNVK
EEEEECCCHHHHHHHHCCCHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QIDPYSLENTFKNTNEIDIIYPGVGENYDFITEFKNLHHKEIFNLVRDEDLFAWKFAKRG
CCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FFKFKENIPKINQRILENFSKNNF
HHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFLLKAQNTWENFAKYKINDYAKLRNFDFGPNNESSVSKLSPFITHRILSEYDLIHDIK
CEEEECCHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SKYKIKNSTKFVEEIFWRVYWKGWMENRPKVWRNFISENNLDFDYELYENAINGNTELDF
HHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHH
FNSWVHELKQYNYLHNHTRMWFASTWIFNLGLPWQLGAKFFFKYLFDGDASSNLLSWRWV
HHHHHHHHHHHHHHHHCHHHEEEEEEHEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEC
GGLQTKGKQYLFSSSNLRKFSNNRFNVEKISNQQIFLEESNQIPFEDEIYKNDMDPKSDN
CCCCCCCCCEEECCCCHHHHCCCCEEEEECCCCEEEEECCCCCCCCHHHHCCCCCCCCCC
LIMFENDLHLATLKNLLPSYKKVFIILLKNEQRQIKLSESVLKFKQDLVSEFVEQFDNVK
EEEEECCCHHHHHHHHCCCHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QIDPYSLENTFKNTNEIDIIYPGVGENYDFITEFKNLHHKEIFNLVRDEDLFAWKFAKRG
CCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FFKFKENIPKINQRILENFSKNNF
HHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]