| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969093
Identifier: 123969093
GI number: 123969093
Start: 1337294
End: 1337845
Strand: Reverse
Name: 123969093
Synonym: A9601_15611
Alternate gene names: NA
Gene position: 1337845-1337294 (Counterclockwise)
Preceding gene: 123969094
Following gene: 123969087
Centisome position: 80.12
GC content: 34.24
Gene sequence:
>552_bases GTGCTTTCAACAATTCTTACAAAGTCGTTTAGCAAAGATACTGCTTTATTAATTCTTAGAGTTATAACTGGAACTGTTCT TATTCATCACGGTTATGAGAAATTAGCAAATATAGAAAATTTCGCTGATGCTTTTGTAAGACCACTTCACCTCCCATTCC CAATATTTTTATCATACATAGCGGCATTCTCAGAAATAGGTGGTAGTTGGTTACTAATTATCGGCTTAGCCACAAGATTT GGAGCTTTGGCAATTGTTGGAACAATTTCTGTCGCTATATATCATGCACTTGTTACTTCAGGTTTTAATATTTTCTTACT AGAGCTTTTACTCTTATATTTTGCTTCAGCAACTTCAATTGTATTAACAGGCCCCGGTAACTTCTCCTTAGATGAAGTCA TTATCAGAATTTTGAAATCTGAAGATGAGGAGGAAATTATAGCTTCAACAAAAGTTAAACCTTCCAAGCAAGTCGAAGTC AAAGAAGAAACAAGTAAAGGTGGCTTATTTCAATTTTTGCAAGCGAACATTCTTTCAGATACTTCAAGCTAA
Upstream 100 bases:
>100_bases GGTAAGTAAGTATAAATACTTATTTAGGTATGACTTTTGCTCTTTAATCCACGATGGATACTGTGACTAGTTATTTTTAC TTAAGGATAATTTTTTTATA
Downstream 100 bases:
>100_bases CTTTTTAGGATAAAGGTTATTGATTAGTTCTAACCTTTTTCGATAACTGTTTTTCTTCTCAAGTTTTATCTTAATTGTTG CTTCAGATAGACTTATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MLSTILTKSFSKDTALLILRVITGTVLIHHGYEKLANIENFADAFVRPLHLPFPIFLSYIAAFSEIGGSWLLIIGLATRF GALAIVGTISVAIYHALVTSGFNIFLLELLLLYFASATSIVLTGPGNFSLDEVIIRILKSEDEEEIIASTKVKPSKQVEV KEETSKGGLFQFLQANILSDTSS
Sequences:
>Translated_183_residues MLSTILTKSFSKDTALLILRVITGTVLIHHGYEKLANIENFADAFVRPLHLPFPIFLSYIAAFSEIGGSWLLIIGLATRF GALAIVGTISVAIYHALVTSGFNIFLLELLLLYFASATSIVLTGPGNFSLDEVIIRILKSEDEEEIIASTKVKPSKQVEV KEETSKGGLFQFLQANILSDTSS >Mature_183_residues MLSTILTKSFSKDTALLILRVITGTVLIHHGYEKLANIENFADAFVRPLHLPFPIFLSYIAAFSEIGGSWLLIIGLATRF GALAIVGTISVAIYHALVTSGFNIFLLELLLLYFASATSIVLTGPGNFSLDEVIIRILKSEDEEEIIASTKVKPSKQVEV KEETSKGGLFQFLQANILSDTSS
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19949; Mature: 19949
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTILTKSFSKDTALLILRVITGTVLIHHGYEKLANIENFADAFVRPLHLPFPIFLSYI CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AAFSEIGGSWLLIIGLATRFGALAIVGTISVAIYHALVTSGFNIFLLELLLLYFASATSI HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE VLTGPGNFSLDEVIIRILKSEDEEEIIASTKVKPSKQVEVKEETSKGGLFQFLQANILSD EEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEHHCCCCCHHHHHHHHHHHCC TSS CCC >Mature Secondary Structure MLSTILTKSFSKDTALLILRVITGTVLIHHGYEKLANIENFADAFVRPLHLPFPIFLSYI CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AAFSEIGGSWLLIIGLATRFGALAIVGTISVAIYHALVTSGFNIFLLELLLLYFASATSI HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE VLTGPGNFSLDEVIIRILKSEDEEEIIASTKVKPSKQVEVKEETSKGGLFQFLQANILSD EEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEHHCCCCCHHHHHHHHHHHCC TSS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA