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The map label for this gene is codA [H]

Identifier: 123969035

GI number: 123969035

Start: 1286448

End: 1287683

Strand: Reverse

Name: codA [H]

Synonym: A9601_15031

Alternate gene names: 123969035

Gene position: 1287683-1286448 (Counterclockwise)

Preceding gene: 123969042

Following gene: 123969034

Centisome position: 77.11

GC content: 32.28

Gene sequence:

>1236_bases
TTGAGTAATTCCGGCACAGCTGAGGTTCTTATTCCCAGAAGCCTTTGTCTAATAGAAGATATAGATAACCTCATTATCGA
TGTAGAGGATTTATGTTCAGTTTCCATTAGTTGGGAGGATGGATTAGTTTCTGAGTTAAAGCCTTTAAAAAATAAAATTA
CAAAACCAAAAAATATTTTATTCCCAAGATTTGTTGAAACGCATTCGCATTTTGATAAATCTTTTACATGGGCAGACTTT
CCTAATCTGGAATCAAACTACGGAGGAGCGTTATCAGTAAATCTTGAAGAACATAAAACTAGAACTACAGATAAGGTTCT
TGAGAGAGTTGATAAATCATTAAAACTTGCCATACAAAATGGATACCGAGCAATTAGAAGTCATATCGATACATACAAAG
GTCAATCTATTGACATTTGGATTGAACTTTTTAAATTACAAAAAATATTTTCATCTGAGTTGACACTACAATACGTTGCT
CTAGCTCCAGTGGAATTCTGGGATACAACTGATGGAGAAGATTTGGCAAAAATATTTTCCTCTAATGGAGGTATTTTAGG
AGGTGTTATTGTACCCCCTTTCAATAAAAAAAATACAAGCAAATTTCTAGCAAAGATGCTTCTTCTTGCTAGAAAATATA
AATTAGAAATTGATTTGCATATAGATGAATCAATTATTGAACCTGGAGCGGGAATAAAAGTTTTATTAGAAACAATAGAA
AATTTAAAAATTAATAGTATTCCAATCACTTGTAGTCATTTGAGTAGTCTTATTTCTCTAAGTAATAGTGAGATTTTAAA
TTTAGGAGAAAAAATGGCTGAGAAAAATATTAAGGTTGTTGCTTTACCCCTAACAAATTTTTGGCTGCTCAATCGAAGTA
ATAAAACTACTTCATTTAAAAGACCAGTTGCGCCAATAAAGCAATTACAAAAATCACATGTGGATGTATCTCTTGGTAGT
GATAATGTTCAAGACCCTTGGTACCCATTTGGTAATTTTGACCCTTTTTATATGCTGTCTTGCTCGATGCCTATGCTTCA
ACTAAATCCCTGGGAGCGAATGACTCTATCTTCTATTTTTTTAGCTCCAAGCAGATTATTAAATTTAAAATGGGATGGTT
TAATTAAAAAAGGTTGTCCTGCTGATTTTGTGATTTTAGATGCACAAAGGTGGGCAGATGTTTTTTCGAGCAATTTAAAG
AGAAAAGTATTTATAAACGGCGATTTACATTCCTAA

Upstream 100 bases:

>100_bases
TAATTTTTCATAGTTATTTTTATCTTTTAGCGAAATTTGAATTATTTTCAAATTCAGTAAAGTTTTCTTATGATTTAAAA
TAAAAAGAAAATTTAAAAAT

Downstream 100 bases:

>100_bases
TTGGCTAATTTATATACAAATCATAAAAATTTTATTAATGATATCAAAACTTAAATTTATAGACAAATTTAGAGAAGTCA
AAAACTTAGAGATTATTGAA

Product: putative cytosine deaminase

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSNSGTAEVLIPRSLCLIEDIDNLIIDVEDLCSVSISWEDGLVSELKPLKNKITKPKNILFPRFVETHSHFDKSFTWADF
PNLESNYGGALSVNLEEHKTRTTDKVLERVDKSLKLAIQNGYRAIRSHIDTYKGQSIDIWIELFKLQKIFSSELTLQYVA
LAPVEFWDTTDGEDLAKIFSSNGGILGGVIVPPFNKKNTSKFLAKMLLLARKYKLEIDLHIDESIIEPGAGIKVLLETIE
NLKINSIPITCSHLSSLISLSNSEILNLGEKMAEKNIKVVALPLTNFWLLNRSNKTTSFKRPVAPIKQLQKSHVDVSLGS
DNVQDPWYPFGNFDPFYMLSCSMPMLQLNPWERMTLSSIFLAPSRLLNLKWDGLIKKGCPADFVILDAQRWADVFSSNLK
RKVFINGDLHS

Sequences:

>Translated_411_residues
MSNSGTAEVLIPRSLCLIEDIDNLIIDVEDLCSVSISWEDGLVSELKPLKNKITKPKNILFPRFVETHSHFDKSFTWADF
PNLESNYGGALSVNLEEHKTRTTDKVLERVDKSLKLAIQNGYRAIRSHIDTYKGQSIDIWIELFKLQKIFSSELTLQYVA
LAPVEFWDTTDGEDLAKIFSSNGGILGGVIVPPFNKKNTSKFLAKMLLLARKYKLEIDLHIDESIIEPGAGIKVLLETIE
NLKINSIPITCSHLSSLISLSNSEILNLGEKMAEKNIKVVALPLTNFWLLNRSNKTTSFKRPVAPIKQLQKSHVDVSLGS
DNVQDPWYPFGNFDPFYMLSCSMPMLQLNPWERMTLSSIFLAPSRLLNLKWDGLIKKGCPADFVILDAQRWADVFSSNLK
RKVFINGDLHS
>Mature_410_residues
SNSGTAEVLIPRSLCLIEDIDNLIIDVEDLCSVSISWEDGLVSELKPLKNKITKPKNILFPRFVETHSHFDKSFTWADFP
NLESNYGGALSVNLEEHKTRTTDKVLERVDKSLKLAIQNGYRAIRSHIDTYKGQSIDIWIELFKLQKIFSSELTLQYVAL
APVEFWDTTDGEDLAKIFSSNGGILGGVIVPPFNKKNTSKFLAKMLLLARKYKLEIDLHIDESIIEPGAGIKVLLETIEN
LKINSIPITCSHLSSLISLSNSEILNLGEKMAEKNIKVVALPLTNFWLLNRSNKTTSFKRPVAPIKQLQKSHVDVSLGSD
NVQDPWYPFGNFDPFYMLSCSMPMLQLNPWERMTLSSIFLAPSRLLNLKWDGLIKKGCPADFVILDAQRWADVFSSNLKR
KVFINGDLHS

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=387, Percent_Identity=25.5813953488372, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1786517, Length=350, Percent_Identity=24, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 46413; Mature: 46282

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSGTAEVLIPRSLCLIEDIDNLIIDVEDLCSVSISWEDGLVSELKPLKNKITKPKNIL
CCCCCCEEEEECCHHHHHHHHHHHEEEHHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCC
FPRFVETHSHFDKSFTWADFPNLESNYGGALSVNLEEHKTRTTDKVLERVDKSLKLAIQN
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHH
GYRAIRSHIDTYKGQSIDIWIELFKLQKIFSSELTLQYVALAPVEFWDTTDGEDLAKIFS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCHHHHHHHHH
SNGGILGGVIVPPFNKKNTSKFLAKMLLLARKYKLEIDLHIDESIIEPGAGIKVLLETIE
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEEECHHHHCCCCCHHHHHHHHH
NLKINSIPITCSHLSSLISLSNSEILNLGEKMAEKNIKVVALPLTNFWLLNRSNKTTSFK
CCEECCCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCC
RPVAPIKQLQKSHVDVSLGSDNVQDPWYPFGNFDPFYMLSCSMPMLQLNPWERMTLSSIF
CCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHH
LAPSRLLNLKWDGLIKKGCPADFVILDAQRWADVFSSNLKRKVFINGDLHS
HCHHHHCCCCHHCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCCC
>Mature Secondary Structure 
SNSGTAEVLIPRSLCLIEDIDNLIIDVEDLCSVSISWEDGLVSELKPLKNKITKPKNIL
CCCCCEEEEECCHHHHHHHHHHHEEEHHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCC
FPRFVETHSHFDKSFTWADFPNLESNYGGALSVNLEEHKTRTTDKVLERVDKSLKLAIQN
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHH
GYRAIRSHIDTYKGQSIDIWIELFKLQKIFSSELTLQYVALAPVEFWDTTDGEDLAKIFS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCHHHHHHHHH
SNGGILGGVIVPPFNKKNTSKFLAKMLLLARKYKLEIDLHIDESIIEPGAGIKVLLETIE
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEEECHHHHCCCCCHHHHHHHHH
NLKINSIPITCSHLSSLISLSNSEILNLGEKMAEKNIKVVALPLTNFWLLNRSNKTTSFK
CCEECCCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCC
RPVAPIKQLQKSHVDVSLGSDNVQDPWYPFGNFDPFYMLSCSMPMLQLNPWERMTLSSIF
CCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHH
LAPSRLLNLKWDGLIKKGCPADFVILDAQRWADVFSSNLKRKVFINGDLHS
HCHHHHCCCCHHCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]