| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969013
Identifier: 123969013
GI number: 123969013
Start: 1261996
End: 1262523
Strand: Direct
Name: 123969013
Synonym: A9601_14811
Alternate gene names: NA
Gene position: 1261996-1262523 (Clockwise)
Preceding gene: 123969008
Following gene: 123969019
Centisome position: 75.57
GC content: 31.25
Gene sequence:
>528_bases ATGAAAAAAAAAACCATAAATTTAAAAGAAGCTTCGTTCACGCAAGCAATAAACATATCCGCACAATGGTGCAAAGAGTG GGGTGAAGATTTACTCAGCGAAGAGGTTTTAGCAGATAGAATCGCGGAACTAACTAAAACAAGAAATGGACTCAGAGGAT TTTTTGCATACGCTTTATCTGATAAAGATTGTTTTTTATTAGATAAACTTCCTTTTTCACTAATTTACAAACTGAACGAA GGTGGTGATGCTGTAACAGACATAGTAGTAAAAAATTTAATAATGAGTTCTGCTCAAATTATTATTCATCGAAGAGATAA TAATCATGAATATGAGATAACATCAGAAAACATTTCAGATAGATGTAAGGCTATTTTAAGACTGTTAGAATCTAAGTCAG TTGCAAAGTCTGTCAATCAAGTCCTTAGAGACTTAGATGATATGGGCAATAGTTTTGATAAATCAGTAAAGTATGATAAA GAGCAAAAGGAATTTATAAAAAAACAAATTCTTGATATCGCCCAATAA
Upstream 100 bases:
>100_bases GTAGATTTACCCACATTTGGCCTTCCTAGTAAAGTTACAAACCCAGATCTATAATTGGTCAAAGACTTTTAATGCATCAA TAATAAAATTCTGATCAAAA
Downstream 100 bases:
>100_bases AAAAGCGTAGAAACAAATCTACGCTTTTAGTTTAGTTATTTACGTAATGTGTTTAGTCTCTTCTTCCGCCTCCTTGAAGT GCAATCATTAATCTCAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKKKTINLKEASFTQAINISAQWCKEWGEDLLSEEVLADRIAELTKTRNGLRGFFAYALSDKDCFLLDKLPFSLIYKLNE GGDAVTDIVVKNLIMSSAQIIIHRRDNNHEYEITSENISDRCKAILRLLESKSVAKSVNQVLRDLDDMGNSFDKSVKYDK EQKEFIKKQILDIAQ
Sequences:
>Translated_175_residues MKKKTINLKEASFTQAINISAQWCKEWGEDLLSEEVLADRIAELTKTRNGLRGFFAYALSDKDCFLLDKLPFSLIYKLNE GGDAVTDIVVKNLIMSSAQIIIHRRDNNHEYEITSENISDRCKAILRLLESKSVAKSVNQVLRDLDDMGNSFDKSVKYDK EQKEFIKKQILDIAQ >Mature_175_residues MKKKTINLKEASFTQAINISAQWCKEWGEDLLSEEVLADRIAELTKTRNGLRGFFAYALSDKDCFLLDKLPFSLIYKLNE GGDAVTDIVVKNLIMSSAQIIIHRRDNNHEYEITSENISDRCKAILRLLESKSVAKSVNQVLRDLDDMGNSFDKSVKYDK EQKEFIKKQILDIAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20050; Mature: 20050
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKTINLKEASFTQAINISAQWCKEWGEDLLSEEVLADRIAELTKTRNGLRGFFAYALS CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DKDCFLLDKLPFSLIYKLNEGGDAVTDIVVKNLIMSSAQIIIHRRDNNHEYEITSENISD CCCEEEHHHCCHHHHEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCHHH RCKAILRLLESKSVAKSVNQVLRDLDDMGNSFDKSVKYDKEQKEFIKKQILDIAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKKTINLKEASFTQAINISAQWCKEWGEDLLSEEVLADRIAELTKTRNGLRGFFAYALS CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DKDCFLLDKLPFSLIYKLNEGGDAVTDIVVKNLIMSSAQIIIHRRDNNHEYEITSENISD CCCEEEHHHCCHHHHEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCHHH RCKAILRLLESKSVAKSVNQVLRDLDDMGNSFDKSVKYDKEQKEFIKKQILDIAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA