| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969010
Identifier: 123969010
GI number: 123969010
Start: 1259383
End: 1259829
Strand: Reverse
Name: 123969010
Synonym: A9601_14781
Alternate gene names: NA
Gene position: 1259829-1259383 (Counterclockwise)
Preceding gene: 123969011
Following gene: 123969009
Centisome position: 75.44
GC content: 28.86
Gene sequence:
>447_bases ATGAGTTTTAATTTAAATTTGAAAAAAAATTTTCAAAGATTTTGTTTATTATTAATTTGTTCAGTAGTTTTAATTTTTCA ATCTGAATTTCCCAATTTAAAAGCTCTTACAATGGATAATTTTCAAAGTGAAATGGTCATAGAGGAATTAAGACTTAAAG TACCTGCTGATGCAAAAGGAGCTTGGCTAAATGCGGAGAAAGAAATATGGGAGCCATGGTTATCTTCTCAAGATGGTTTT TTGGGTAGACAGTTATTTTGGGATAAGGAAAAAGAAGAAGCTTTAATATTAGTAAATTGGAAAAGTAAGAAGTTATGGAA AAGCATACCAATGTCAGAAGTAAATTTAGTTCAACAAAAATTTGAAGATAATGTTAAAGCTGCTCTAAATGTAGGGGATA ATCCTTTTGAATTGATTTATGAGGGAGAATTGGATAAACAAAGATGA
Upstream 100 bases:
>100_bases GAAAATTTAATTGGCATTAAAGCAACCACTAATGAAAAATTGGGTCCAGAAGGTAGAGAAGAGGGTATAAGTTGCCATTC AGTAGTTCTTCTTGAGAAAA
Downstream 100 bases:
>100_bases ATTTTGATATCAAGTTTGATTTTCAAAGAAGAGATAGGCTTGGACTCATTGAGGCTATTTGGGGGCAAGATAAGAGCATC GATCAATTAGAAAGATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSFNLNLKKNFQRFCLLLICSVVLIFQSEFPNLKALTMDNFQSEMVIEELRLKVPADAKGAWLNAEKEIWEPWLSSQDGF LGRQLFWDKEKEEALILVNWKSKKLWKSIPMSEVNLVQQKFEDNVKAALNVGDNPFELIYEGELDKQR
Sequences:
>Translated_148_residues MSFNLNLKKNFQRFCLLLICSVVLIFQSEFPNLKALTMDNFQSEMVIEELRLKVPADAKGAWLNAEKEIWEPWLSSQDGF LGRQLFWDKEKEEALILVNWKSKKLWKSIPMSEVNLVQQKFEDNVKAALNVGDNPFELIYEGELDKQR >Mature_147_residues SFNLNLKKNFQRFCLLLICSVVLIFQSEFPNLKALTMDNFQSEMVIEELRLKVPADAKGAWLNAEKEIWEPWLSSQDGFL GRQLFWDKEKEEALILVNWKSKKLWKSIPMSEVNLVQQKFEDNVKAALNVGDNPFELIYEGELDKQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17356; Mature: 17225
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNLNLKKNFQRFCLLLICSVVLIFQSEFPNLKALTMDNFQSEMVIEELRLKVPADAKG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCC AWLNAEKEIWEPWLSSQDGFLGRQLFWDKEKEEALILVNWKSKKLWKSIPMSEVNLVQQK CCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHH FEDNVKAALNVGDNPFELIYEGELDKQR HHCCHHEEECCCCCCEEEEECCCCCCCC >Mature Secondary Structure SFNLNLKKNFQRFCLLLICSVVLIFQSEFPNLKALTMDNFQSEMVIEELRLKVPADAKG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCC AWLNAEKEIWEPWLSSQDGFLGRQLFWDKEKEEALILVNWKSKKLWKSIPMSEVNLVQQK CCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHH FEDNVKAALNVGDNPFELIYEGELDKQR HHCCHHEEECCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA