| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969003
Identifier: 123969003
GI number: 123969003
Start: 1255459
End: 1255992
Strand: Reverse
Name: 123969003
Synonym: A9601_14711
Alternate gene names: NA
Gene position: 1255992-1255459 (Counterclockwise)
Preceding gene: 123969009
Following gene: 123969001
Centisome position: 75.21
GC content: 36.14
Gene sequence:
>534_bases ATGTCTGACAAAATTGATTTTCAGTCCCTTTCATTTGGAATGCGGCGCATTGGGTGGATACGCTTTTGGGTTCAATCCAT TTTAGGTGTTGTTGTTGCAGCTGTTTTGCTTTTTTCAAATGTTGTAAATAATAGCGAAGGACAGCTTGGCTTAGCGCCTG GTCTATCACTTACGACAATATCTTTGATCTTACTACTTTTTAGTCTTTGGCAAGGTTGGTTAATAGTTAGAACAGGTAGA GCAATCGCAAGCAACGCTAGACCTTCAAGAGGACAAACAAGTAAATTAATAAAAAGAGGACTTATAGTTGATTTATTAGG TATTTTGTTTGGATTAATTGGATATCAAGCACTTATGGGGGCTCTATTTATACAGGCATCCTCTCAAACAACTGGTCAAT TGATAACTGCGACATCTGATATTCCAATTACTGGACTTGAAATATTATCAGTTCTCAGTAACACACAAGTTATTGCTGCT CATTTTTTTGGGCTTTGCTTTTCTTTATGGCTTTTAAGAAGGATTTATAAATGA
Upstream 100 bases:
>100_bases TTAACTTCAGATGGCGATATTAAAGAGATCAAAAGATTACGTGCAATTTTATGATTTTGATGGCAAATTTGAATAGATTA TAATTTATTCAATCAAATGA
Downstream 100 bases:
>100_bases ATTATTAATTTTAGGTAAGTTTTCTAAATCACCTCTCCAAAATAAATCTGGTTCCACAGGTGTTAGAGATATTTTATTGT CTTGTATTTGAGATACGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSDKIDFQSLSFGMRRIGWIRFWVQSILGVVVAAVLLFSNVVNNSEGQLGLAPGLSLTTISLILLLFSLWQGWLIVRTGR AIASNARPSRGQTSKLIKRGLIVDLLGILFGLIGYQALMGALFIQASSQTTGQLITATSDIPITGLEILSVLSNTQVIAA HFFGLCFSLWLLRRIYK
Sequences:
>Translated_177_residues MSDKIDFQSLSFGMRRIGWIRFWVQSILGVVVAAVLLFSNVVNNSEGQLGLAPGLSLTTISLILLLFSLWQGWLIVRTGR AIASNARPSRGQTSKLIKRGLIVDLLGILFGLIGYQALMGALFIQASSQTTGQLITATSDIPITGLEILSVLSNTQVIAA HFFGLCFSLWLLRRIYK >Mature_176_residues SDKIDFQSLSFGMRRIGWIRFWVQSILGVVVAAVLLFSNVVNNSEGQLGLAPGLSLTTISLILLLFSLWQGWLIVRTGRA IASNARPSRGQTSKLIKRGLIVDLLGILFGLIGYQALMGALFIQASSQTTGQLITATSDIPITGLEILSVLSNTQVIAAH FFGLCFSLWLLRRIYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19354; Mature: 19223
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKIDFQSLSFGMRRIGWIRFWVQSILGVVVAAVLLFSNVVNNSEGQLGLAPGLSLTTI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHH SLILLLFSLWQGWLIVRTGRAIASNARPSRGQTSKLIKRGLIVDLLGILFGLIGYQALMG HHHHHHHHHHCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFIQASSQTTGQLITATSDIPITGLEILSVLSNTQVIAAHFFGLCFSLWLLRRIYK HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDKIDFQSLSFGMRRIGWIRFWVQSILGVVVAAVLLFSNVVNNSEGQLGLAPGLSLTTI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHH SLILLLFSLWQGWLIVRTGRAIASNARPSRGQTSKLIKRGLIVDLLGILFGLIGYQALMG HHHHHHHHHHCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFIQASSQTTGQLITATSDIPITGLEILSVLSNTQVIAAHFFGLCFSLWLLRRIYK HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA