| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968970
Identifier: 123968970
GI number: 123968970
Start: 1223774
End: 1224493
Strand: Direct
Name: 123968970
Synonym: A9601_14381
Alternate gene names: NA
Gene position: 1223774-1224493 (Clockwise)
Preceding gene: 123968968
Following gene: 123968971
Centisome position: 73.28
GC content: 24.58
Gene sequence:
>720_bases ATGAATTTGAAGAACAAGATAAAAAAAATTAAACGTTCTTCAAAGAAAAATAATGTTGATATTTTTTCTTTTACTAAATT CACTAGAACTTTAAAGGATGTATATAAAATTTCAATAATGAGATCTTTAATGAATCAACTGATTGAAAAAATCTATTTTA AAGGAAGGATAGTAGATATAGGTGGCGGAAAAAACTCTAATTATTCATGCATCATTAGATGTGATAACTATACCTCAATT AATATTGATAAAAAAATAAATCCTGATATTTTGGTTGATATTAATGAAAAATTCCCCTTAGAAGACGATCAATTTGATCA ATGCCTACTATTTAATGTTTTAGAACATGTTTATGACTGGGATTTTCTTTTTGCAGAGATAAAAAGAGTTTTAAAAAATG ATTCTTTTATACATATAATTATTCCTTTTATTTATCCAATTCATGGTTCTCCAAACGATTATATTAGAGTAACAAGTGAT TATATTAAAAATTTTCTTAGAAAAAATTCATTTAAAAATATAACTACTTCTCCTATCTCTTATGGGCCATTTACAAACTC GCAACTGATAGGTTATCGCCACAAAATAATAAATGGACCTTGCTCGCAATTTGCGGTAATTCTAGATAAAGCTTTTCATA AATGTTTTAAAGAAAAATACTTTAGATACAATACAACTAATCCACTTTTCTATTATGTAAAAGCTAATTTAAAAAAATAA
Upstream 100 bases:
>100_bases TAAAATCTTTAACTTCATTATAAAAATATATATTTTCAAATTGACTAAATTTATTTGAATAGTCTCAATTATCTCTTACT ATAAATAAAGTTTTTACAAG
Downstream 100 bases:
>100_bases TAAATAAATTACATTTTCTTTAAATATGTTAAAAATTATATAAAAATGAATATTAAATTAATAAACACTACTATTAAATT CTCATGATGAACAAATGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNLKNKIKKIKRSSKKNNVDIFSFTKFTRTLKDVYKISIMRSLMNQLIEKIYFKGRIVDIGGGKNSNYSCIIRCDNYTSI NIDKKINPDILVDINEKFPLEDDQFDQCLLFNVLEHVYDWDFLFAEIKRVLKNDSFIHIIIPFIYPIHGSPNDYIRVTSD YIKNFLRKNSFKNITTSPISYGPFTNSQLIGYRHKIINGPCSQFAVILDKAFHKCFKEKYFRYNTTNPLFYYVKANLKK
Sequences:
>Translated_239_residues MNLKNKIKKIKRSSKKNNVDIFSFTKFTRTLKDVYKISIMRSLMNQLIEKIYFKGRIVDIGGGKNSNYSCIIRCDNYTSI NIDKKINPDILVDINEKFPLEDDQFDQCLLFNVLEHVYDWDFLFAEIKRVLKNDSFIHIIIPFIYPIHGSPNDYIRVTSD YIKNFLRKNSFKNITTSPISYGPFTNSQLIGYRHKIINGPCSQFAVILDKAFHKCFKEKYFRYNTTNPLFYYVKANLKK >Mature_239_residues MNLKNKIKKIKRSSKKNNVDIFSFTKFTRTLKDVYKISIMRSLMNQLIEKIYFKGRIVDIGGGKNSNYSCIIRCDNYTSI NIDKKINPDILVDINEKFPLEDDQFDQCLLFNVLEHVYDWDFLFAEIKRVLKNDSFIHIIIPFIYPIHGSPNDYIRVTSD YIKNFLRKNSFKNITTSPISYGPFTNSQLIGYRHKIINGPCSQFAVILDKAFHKCFKEKYFRYNTTNPLFYYVKANLKK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28255; Mature: 28255
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKNKIKKIKRSSKKNNVDIFSFTKFTRTLKDVYKISIMRSLMNQLIEKIYFKGRIVDI CCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC GGGKNSNYSCIIRCDNYTSINIDKKINPDILVDINEKFPLEDDQFDQCLLFNVLEHVYDW CCCCCCCCEEEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCH DFLFAEIKRVLKNDSFIHIIIPFIYPIHGSPNDYIRVTSDYIKNFLRKNSFKNITTSPIS HHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCC YGPFTNSQLIGYRHKIINGPCSQFAVILDKAFHKCFKEKYFRYNTTNPLFYYVKANLKK CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEECCCCCEEEEEEECCCC >Mature Secondary Structure MNLKNKIKKIKRSSKKNNVDIFSFTKFTRTLKDVYKISIMRSLMNQLIEKIYFKGRIVDI CCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC GGGKNSNYSCIIRCDNYTSINIDKKINPDILVDINEKFPLEDDQFDQCLLFNVLEHVYDW CCCCCCCCEEEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCH DFLFAEIKRVLKNDSFIHIIIPFIYPIHGSPNDYIRVTSDYIKNFLRKNSFKNITTSPIS HHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCC YGPFTNSQLIGYRHKIINGPCSQFAVILDKAFHKCFKEKYFRYNTTNPLFYYVKANLKK CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEECCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA