| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968969
Identifier: 123968969
GI number: 123968969
Start: 1214868
End: 1215122
Strand: Reverse
Name: 123968969
Synonym: A9601_14371
Alternate gene names: NA
Gene position: 1215122-1214868 (Counterclockwise)
Preceding gene: 123968981
Following gene: 123968967
Centisome position: 72.77
GC content: 36.08
Gene sequence:
>255_bases TTGTCCGATAAGGTTGCTTGTAATTCAGCATTAGCAGTATTTACTGCCGTAACTGGATTATTAGTTGTTCCATCTACTGT TACTTGTAACGCCGAAAAAGTAGCTCCTGGAGCTAAGTATATATTCTCGCTAAAGGTAAGGATTAATTTACTTCCATCAT TTGAAATCTCAGAAGTAGTTAATGTTGGATTTGTATCAGTAACCGGCATACCAGGATCAACGATTATTGATTCGTTATTG TTATTGCCATCTTGA
Upstream 100 bases:
>100_bases GCTTTGAGAGGTGACGCTGCTTAAGTAATTGCCAGTTGAATCTTGAACCGTTTGGGTGCTATGTGAGTAATCAAGAGTTA TTTGTTGGCCATAAAGAATT
Downstream 100 bases:
>100_bases TAACTTAAAACAGTCCTTATTTTTTTACCTACTTCATTCGAAGTGATCGTATAACTAGATTGAGTTCCTACTTCTTCCCA TTCAGTTGTATTTATTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSDKVACNSALAVFTAVTGLLVVPSTVTCNAEKVAPGAKYIFSLKVRINLLPSFEISEVVNVGFVSVTGIPGSTIIDSLL LLPS
Sequences:
>Translated_84_residues MSDKVACNSALAVFTAVTGLLVVPSTVTCNAEKVAPGAKYIFSLKVRINLLPSFEISEVVNVGFVSVTGIPGSTIIDSLL LLPS >Mature_83_residues SDKVACNSALAVFTAVTGLLVVPSTVTCNAEKVAPGAKYIFSLKVRINLLPSFEISEVVNVGFVSVTGIPGSTIIDSLLL LPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8695; Mature: 8564
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKVACNSALAVFTAVTGLLVVPSTVTCNAEKVAPGAKYIFSLKVRINLLPSFEISEVV CCCCCCCCHHHHHHHHHHHHEECCCEEECCHHHCCCCCEEEEEEEEEEEECCCCCHHHHH NVGFVSVTGIPGSTIIDSLLLLPS CCCEEEEECCCCHHHHHHHHCCCC >Mature Secondary Structure SDKVACNSALAVFTAVTGLLVVPSTVTCNAEKVAPGAKYIFSLKVRINLLPSFEISEVV CCCCCCCHHHHHHHHHHHHEECCCEEECCHHHCCCCCEEEEEEEEEEEECCCCCHHHHH NVGFVSVTGIPGSTIIDSLLLLPS CCCEEEEECCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA