Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968966

Identifier: 123968966

GI number: 123968966

Start: 1208498

End: 1208935

Strand: Reverse

Name: 123968966

Synonym: A9601_14341

Alternate gene names: NA

Gene position: 1208935-1208498 (Counterclockwise)

Preceding gene: 123968967

Following gene: 123968959

Centisome position: 72.4

GC content: 29.68

Gene sequence:

>438_bases
ATGTTATATCAGCGTTATTTGTTACCTAAAGAATCAAGATCGAATTTTTATTTGCAAGCTAATACCGATATTTCCACTTT
TAAATTATCTCATGATATAGATCTAACAAAAGAAACATATACTGATGGTAATGTTCAAGTTACTTGTAGTGCTTGTGGGA
TTCTGACTATTCAAACTAATCCAGATAAAGTACACATCATTCCTACTGTCAGCATTGGCTATCAATACAAAAATACTCCT
AATTTCAAAACAAATTTCTCGGTTGGTATTCAATATATAGATCCAGGATCACTAGAAAATTTCACAAACACAGATTACAA
TCTTCCCTCTTATGTACAAACAAGAGTAGATGATTGGGTTAAGAAAACTCAGAATAAAATTGATAAGTATTCAGAATTTC
AACCATCATTAAATATTGGTTTTAGTTATGCTTTTTGA

Upstream 100 bases:

>100_bases
ACTTGGGATAAGAATAAATTATTTGCCTGAAGATTTTTTTACTCATAAAAATATATATGTTGATGGTAGAAATGTAAAAG
CAGAATATTTTGGAATTGGG

Downstream 100 bases:

>100_bases
CAATTTTAAAAATATTCTTTAAAAAATCTATTAGTGAGTCTGTAAAGCATCTCGCCCAAAATCTATTTAATCCTAAAATT
CCTGAATATTTAGTATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLYQRYLLPKESRSNFYLQANTDISTFKLSHDIDLTKETYTDGNVQVTCSACGILTIQTNPDKVHIIPTVSIGYQYKNTP
NFKTNFSVGIQYIDPGSLENFTNTDYNLPSYVQTRVDDWVKKTQNKIDKYSEFQPSLNIGFSYAF

Sequences:

>Translated_145_residues
MLYQRYLLPKESRSNFYLQANTDISTFKLSHDIDLTKETYTDGNVQVTCSACGILTIQTNPDKVHIIPTVSIGYQYKNTP
NFKTNFSVGIQYIDPGSLENFTNTDYNLPSYVQTRVDDWVKKTQNKIDKYSEFQPSLNIGFSYAF
>Mature_145_residues
MLYQRYLLPKESRSNFYLQANTDISTFKLSHDIDLTKETYTDGNVQVTCSACGILTIQTNPDKVHIIPTVSIGYQYKNTP
NFKTNFSVGIQYIDPGSLENFTNTDYNLPSYVQTRVDDWVKKTQNKIDKYSEFQPSLNIGFSYAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16695; Mature: 16695

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQRYLLPKESRSNFYLQANTDISTFKLSHDIDLTKETYTDGNVQVTCSACGILTIQTN
CCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEECCCCCEEEEEEECEEEEEECC
PDKVHIIPTVSIGYQYKNTPNFKTNFSVGIQYIDPGSLENFTNTDYNLPSYVQTRVDDWV
CCEEEEEEEEEECEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
KKTQNKIDKYSEFQPSLNIGFSYAF
HHHHHHHHHHHHCCCCCCCCEEECC
>Mature Secondary Structure
MLYQRYLLPKESRSNFYLQANTDISTFKLSHDIDLTKETYTDGNVQVTCSACGILTIQTN
CCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEECCCCCEEEEEEECEEEEEECC
PDKVHIIPTVSIGYQYKNTPNFKTNFSVGIQYIDPGSLENFTNTDYNLPSYVQTRVDDWV
CCEEEEEEEEEECEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
KKTQNKIDKYSEFQPSLNIGFSYAF
HHHHHHHHHHHHCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA