Click here to switch to the map view.

The map label for this gene is yibD [C]

Identifier: 123968928

GI number: 123968928

Start: 1163508

End: 1164449

Strand: Direct

Name: yibD [C]

Synonym: A9601_13951

Alternate gene names: 123968928

Gene position: 1163508-1164449 (Clockwise)

Preceding gene: 123968922

Following gene: 123968929

Centisome position: 69.68

GC content: 26.65

Gene sequence:

>942_bases
ATGCTTATTACAATAGGTATAACATGCTTTAATGCTGAAGATAAGATTGAGAAAGTTATAAAAAATGCAATCCAACAAAC
TTGGACAAAAAAAGAAATTATTATTATTGACGATTGTTCAACTGACGATTCAATTAAAGCTATAAATAAATTCAAGAGTC
GAAATAATATACAAATATTTAAGAATAAAAGAAATAAGGGAATATCTTTTTGCAGAAATAAAATTGTTAATCAAGCAAAA
GGAAGAATTATTTTTTTTATGGATGATGATGACATTTCTGATTTACAAAGAATAGATTTACAAATAAAGGAGATTATAAA
TTCAGGATATCCAAATGAAAAATATATAGCTTGTACAGCCTCAATGGAAAGAGAATATAGATCAGGACATAAAAGAACTT
TAATTGCGATGGGTTCAAAAGGAAGATTACCTAAAGATGACGAGCTGGCAAATTTTTTACTATTTTATGAAAAGAAAAAA
GGGGTTGATTATGGCTTCGGATTACCAACATGCTCTATGGCAATAACTAAAGAATGTTTTGAAAAAGTTGGTCTATTTGA
TGAGTCTTTGGAAAGAGTTGAAGATATGGATTTTTCTATAAGGTTATCATTAAATGGCATAATTTTCACATCAGTTAAAA
ATATTCTCATACATCAAGAGTCATCCTCTAGCAATAATAAAAACTACAAAAACTTTTTATCTGAGGTAAAGCTAATAAAA
AAATATTCAACTTATTTAAAACAAAATAAACTATTATGGCATGCCTTGCAGTGGCCTTATCTTAGATACTATTACTTTAG
TAAAAAATTTATCAGAGCATTTGTTGTAATCGTTTTACTTTTTATAGGAAATCCAAGAAGAACTTTCATACATATCTATA
AGACTGGGAAATCAAGACTAATTCTAGATTTGAAAATTTTCTTTAAAAATTTTTCTAGATAA

Upstream 100 bases:

>100_bases
CAAAATTCTTACGTAAAATTTTGTTTTATAATATCATAATATTAATATAGAGATTAGAATTTAAAAAGTTTAAAAAAAGA
TTACTAACTTATAAAATTAA

Downstream 100 bases:

>100_bases
ATTATGTTTAATTTAAAGCTTTTATAATAACAATTTTGTTTTTTGCATAGTCTTCATTAGAATGAATTAAATAATCTTAA
GGAACATTGATTTTTGCATT

Product: putative glycosyl transferase

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLITIGITCFNAEDKIEKVIKNAIQQTWTKKEIIIIDDCSTDDSIKAINKFKSRNNIQIFKNKRNKGISFCRNKIVNQAK
GRIIFFMDDDDISDLQRIDLQIKEIINSGYPNEKYIACTASMEREYRSGHKRTLIAMGSKGRLPKDDELANFLLFYEKKK
GVDYGFGLPTCSMAITKECFEKVGLFDESLERVEDMDFSIRLSLNGIIFTSVKNILIHQESSSSNNKNYKNFLSEVKLIK
KYSTYLKQNKLLWHALQWPYLRYYYFSKKFIRAFVVIVLLFIGNPRRTFIHIYKTGKSRLILDLKIFFKNFSR

Sequences:

>Translated_313_residues
MLITIGITCFNAEDKIEKVIKNAIQQTWTKKEIIIIDDCSTDDSIKAINKFKSRNNIQIFKNKRNKGISFCRNKIVNQAK
GRIIFFMDDDDISDLQRIDLQIKEIINSGYPNEKYIACTASMEREYRSGHKRTLIAMGSKGRLPKDDELANFLLFYEKKK
GVDYGFGLPTCSMAITKECFEKVGLFDESLERVEDMDFSIRLSLNGIIFTSVKNILIHQESSSSNNKNYKNFLSEVKLIK
KYSTYLKQNKLLWHALQWPYLRYYYFSKKFIRAFVVIVLLFIGNPRRTFIHIYKTGKSRLILDLKIFFKNFSR
>Mature_313_residues
MLITIGITCFNAEDKIEKVIKNAIQQTWTKKEIIIIDDCSTDDSIKAINKFKSRNNIQIFKNKRNKGISFCRNKIVNQAK
GRIIFFMDDDDISDLQRIDLQIKEIINSGYPNEKYIACTASMEREYRSGHKRTLIAMGSKGRLPKDDELANFLLFYEKKK
GVDYGFGLPTCSMAITKECFEKVGLFDESLERVEDMDFSIRLSLNGIIFTSVKNILIHQESSSSNNKNYKNFLSEVKLIK
KYSTYLKQNKLLWHALQWPYLRYYYFSKKFIRAFVVIVLLFIGNPRRTFIHIYKTGKSRLILDLKIFFKNFSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36705; Mature: 36705

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITIGITCFNAEDKIEKVIKNAIQQTWTKKEIIIIDDCSTDDSIKAINKFKSRNNIQIF
CEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEE
KNKRNKGISFCRNKIVNQAKGRIIFFMDDDDISDLQRIDLQIKEIINSGYPNEKYIACTA
ECCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEH
SMEREYRSGHKRTLIAMGSKGRLPKDDELANFLLFYEKKKGVDYGFGLPTCSMAITKECF
HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHH
EKVGLFDESLERVEDMDFSIRLSLNGIIFTSVKNILIHQESSSSNNKNYKNFLSEVKLIK
HHHCCCHHHHHHHHCCCEEEEEEECCEEEEEHHHHEEECCCCCCCCCHHHHHHHHHHHHH
KYSTYLKQNKLLWHALQWPYLRYYYFSKKFIRAFVVIVLLFIGNPRRTFIHIYKTGKSRL
HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEE
ILDLKIFFKNFSR
EEEHEEHHHHCCC
>Mature Secondary Structure
MLITIGITCFNAEDKIEKVIKNAIQQTWTKKEIIIIDDCSTDDSIKAINKFKSRNNIQIF
CEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEE
KNKRNKGISFCRNKIVNQAKGRIIFFMDDDDISDLQRIDLQIKEIINSGYPNEKYIACTA
ECCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEH
SMEREYRSGHKRTLIAMGSKGRLPKDDELANFLLFYEKKKGVDYGFGLPTCSMAITKECF
HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHH
EKVGLFDESLERVEDMDFSIRLSLNGIIFTSVKNILIHQESSSSNNKNYKNFLSEVKLIK
HHHCCCHHHHHHHHCCCEEEEEEECCEEEEEHHHHEEECCCCCCCCCHHHHHHHHHHHHH
KYSTYLKQNKLLWHALQWPYLRYYYFSKKFIRAFVVIVLLFIGNPRRTFIHIYKTGKSRL
HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEE
ILDLKIFFKNFSR
EEEHEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA