| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is yceA [C]
Identifier: 123968733
GI number: 123968733
Start: 1016930
End: 1017862
Strand: Direct
Name: yceA [C]
Synonym: A9601_12001
Alternate gene names: 123968733
Gene position: 1016930-1017862 (Clockwise)
Preceding gene: 123968732
Following gene: 123968734
Centisome position: 60.9
GC content: 27.33
Gene sequence:
>933_bases ATGAAAGGCAAAAATTATAAAATTACTTCTCTATACTCTTTCTTCCCATTTCAAGAAAACTTAATTTTTGATCTCAAAAA TAAATTATTAGAAATCGAAAATGAAAACGATCTTTCAGGTTTGTTAATTTTTGCAAGTGAAGGCATTAATGGAACTATTT GTGCTGAGAAAAATGTAATTGATATTGTTATCAATTTAATTAAAGAATATACAGATAGTAGAAATTTGAATATCAAGGTA AACTTTTCAAAAAAGAAAGTCTTCAAAAAATTAAAAATAAAAATCAAGAAAGAAATAGTTACCATGGGTGTCCCTGAAAT AAACCCTTCAGAAAATAATGGGACCTATATTGATTCAGCTGGTTGGAATAAATTAATTAAAAATCAAAATACAATAGTTA TTGATACTAGAAATCATTATGAGATTTCTGTAGGAACATTTCAGAATTCTATAAACCCAAATACAAGGAACTTTAGCGAA TTCCCCAAGTGGGTAGATGATCATTTAAATACTCATTTAGAAAATAAAGATTCTACAAATATAGCAATGTTTTGTACCGG AGGAATAAGATGTGAAAAAGCTACTAGTTTGCTGAAAAAGAAAGGTTATAAAAATATTTATCACCTAAAAGGCGGTATCC TTCAATACCTTGATGATATACCAAAAAAAGAAAATTTATTTGAAGGGGAATGTTATGTTTTTGATAAAAGAGTTGCTTTA GATCAAGAATTAGAAAAAGGCTCTTATTCGATTTGTCATGCATGTGGAATGCCAATTTCAATTCAAGATCAAAAAAGAAA AGAATACAGAAAGGGTATCCAATGTCATTTCTGCATAGATCAATTCAGTGATAATGATAGGAAAAGGTTTGAAGAAAGAC AAAAACAAATAGATAGATTAAAAGTGGAAAATAATAAAATCAATAAGGACTAA
Upstream 100 bases:
>100_bases CTTCAAATCCATCTTTTCAGTCAGACAGAAAACTTCTCAAAGAGGTTGGAGTATCATTTAACAAAGATTTTGAAACTTGT GAAAAAACATTATCTTCTTT
Downstream 100 bases:
>100_bases TTTTCAAAATCATGAAAGTTGAAGAATTAGAAAAATTAGCAGGTACCATTGGATTAATAATTAAAATTCAAGCTAGAGAA ACACTTGGATTATGTTTTTT
Product: sulfurtransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKGKNYKITSLYSFFPFQENLIFDLKNKLLEIENENDLSGLLIFASEGINGTICAEKNVIDIVINLIKEYTDSRNLNIKV NFSKKKVFKKLKIKIKKEIVTMGVPEINPSENNGTYIDSAGWNKLIKNQNTIVIDTRNHYEISVGTFQNSINPNTRNFSE FPKWVDDHLNTHLENKDSTNIAMFCTGGIRCEKATSLLKKKGYKNIYHLKGGILQYLDDIPKKENLFEGECYVFDKRVAL DQELEKGSYSICHACGMPISIQDQKRKEYRKGIQCHFCIDQFSDNDRKRFEERQKQIDRLKVENNKINKD
Sequences:
>Translated_310_residues MKGKNYKITSLYSFFPFQENLIFDLKNKLLEIENENDLSGLLIFASEGINGTICAEKNVIDIVINLIKEYTDSRNLNIKV NFSKKKVFKKLKIKIKKEIVTMGVPEINPSENNGTYIDSAGWNKLIKNQNTIVIDTRNHYEISVGTFQNSINPNTRNFSE FPKWVDDHLNTHLENKDSTNIAMFCTGGIRCEKATSLLKKKGYKNIYHLKGGILQYLDDIPKKENLFEGECYVFDKRVAL DQELEKGSYSICHACGMPISIQDQKRKEYRKGIQCHFCIDQFSDNDRKRFEERQKQIDRLKVENNKINKD >Mature_310_residues MKGKNYKITSLYSFFPFQENLIFDLKNKLLEIENENDLSGLLIFASEGINGTICAEKNVIDIVINLIKEYTDSRNLNIKV NFSKKKVFKKLKIKIKKEIVTMGVPEINPSENNGTYIDSAGWNKLIKNQNTIVIDTRNHYEISVGTFQNSINPNTRNFSE FPKWVDDHLNTHLENKDSTNIAMFCTGGIRCEKATSLLKKKGYKNIYHLKGGILQYLDDIPKKENLFEGECYVFDKRVAL DQELEKGSYSICHACGMPISIQDQKRKEYRKGIQCHFCIDQFSDNDRKRFEERQKQIDRLKVENNKINKD
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=218, Percent_Identity=33.0275229357798, Blast_Score=126, Evalue=3e-29, Organism=Escherichia coli, GI1787294, Length=268, Percent_Identity=29.1044776119403, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 36002; Mature: 36002
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKNYKITSLYSFFPFQENLIFDLKNKLLEIENENDLSGLLIFASEGINGTICAEKNVI CCCCCEEEEEEEEECCCCCHHHHHHHHHHEEECCCCCCCEEEEEEECCCCEEEECCCCHH DIVINLIKEYTDSRNLNIKVNFSKKKVFKKLKIKIKKEIVTMGVPEINPSENNGTYIDSA HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEECC GWNKLIKNQNTIVIDTRNHYEISVGTFQNSINPNTRNFSEFPKWVDDHLNTHLENKDSTN CHHHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC IAMFCTGGIRCEKATSLLKKKGYKNIYHLKGGILQYLDDIPKKENLFEGECYVFDKRVAL EEEEEECCCCHHHHHHHHHHCCCCCEEHHCCHHHHHHHCCCCCCCCCCCCEEEEECHHHH DQELEKGSYSICHACGMPISIQDQKRKEYRKGIQCHFCIDQFSDNDRKRFEERQKQIDRL HHHHCCCCCHHHHHCCCCCEECHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHE KVENNKINKD EECCCCCCCC >Mature Secondary Structure MKGKNYKITSLYSFFPFQENLIFDLKNKLLEIENENDLSGLLIFASEGINGTICAEKNVI CCCCCEEEEEEEEECCCCCHHHHHHHHHHEEECCCCCCCEEEEEEECCCCEEEECCCCHH DIVINLIKEYTDSRNLNIKVNFSKKKVFKKLKIKIKKEIVTMGVPEINPSENNGTYIDSA HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEECC GWNKLIKNQNTIVIDTRNHYEISVGTFQNSINPNTRNFSEFPKWVDDHLNTHLENKDSTN CHHHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC IAMFCTGGIRCEKATSLLKKKGYKNIYHLKGGILQYLDDIPKKENLFEGECYVFDKRVAL EEEEEECCCCHHHHHHHHHHCCCCCEEHHCCHHHHHHHCCCCCCCCCCCCEEEEECHHHH DQELEKGSYSICHACGMPISIQDQKRKEYRKGIQCHFCIDQFSDNDRKRFEERQKQIDRL HHHHCCCCCHHHHHCCCCCEECHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHE KVENNKINKD EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA