| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is ybbP [H]
Identifier: 123968730
GI number: 123968730
Start: 1014205
End: 1015113
Strand: Direct
Name: ybbP [H]
Synonym: A9601_11971
Alternate gene names: 123968730
Gene position: 1014205-1015113 (Clockwise)
Preceding gene: 123968729
Following gene: 123968731
Centisome position: 60.73
GC content: 34.1
Gene sequence:
>909_bases GTGAATTTCTGGGGAATTATAAATTTAAAGCTTTTATTAGATGTCTTATTTGCTGTTGGTTTCGGACTTTTATTATTCTC TAGAGTAAAAGAACAAAGGACATTGTGGCTTCTAAGGGGATATTTGTTTTTAGTTTCATCTGCATGGTTTATTCAAAGAT ATGCATACTTACCACTAACATCAAAATTAATTGATGCCGTAGTTCTAGCATGCTCTCTCTCATTAGCGATCCTTTGGCAA GGAGAGTTAAGAAGATTAATGGAACTTTTAGGCACTGGGAGGCTTGCCGTATTACTCGGAAATCCACAAAAGGAATTTAG AGCAACTTCAACTACTATTACTCAATTAGTTGATACTGCAGGTAAACTCTCTCAAAATAGAAGGGGAGCTTTAATTGTTG TAGATTTGGGGAGTGACTTAAGACCAGAAGATTTTTTATATTCAGGCACTAATATTGAGGCACAATTATCAACTGACCTT TTAATAAATCTATTTGCAACAGATACACCCTTACATGATGGAGCTGTTCTTGTGAAAGGGAATAAAATAATATCTGCCGG GGTAATACTCCCTTTATCTAGACAAGGAATAAGTAGATACGGGACAAGACATCTTGCTGCACTAGGAATTACGGAAAGAT TTGACAGATGTATTTGTATTGTTGTCTCTGAAGAGACAGGTACATTATCACTAGCAAACCAAGGGAAACTAGAAAGACCA ATTACCAGTAGCAGGTTACAAGAACTTCTTGTAAATTTGATTGGTAATCAAAACACAATTGGAACGAATAAATCAACTTT AGGTAAAAACTCTTTATCCCAAAATACAAAATCAAGTGATAATATTATCAATGATTCTAATGAGAAAGAGAAGGAAAAGC CAGCAATTTTTTTTAACAAAAATGATTAA
Upstream 100 bases:
>100_bases CAAAAAAGAGAAAGTCCATTTGATCTTTTAAGATATGATGTTTTGCCTGATCGCTTTATTAAACAAAATTAGGTACATTT AAATTAATGTTGTTTTTAGT
Downstream 100 bases:
>100_bases ATTATGAGTTTAGGAAAAATAATTGACGCGAAAAATAATAACTTATCCATGAAAATAGATAAGCAAAAAGTTCCAGAACA TGTTGCAATAATAATGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MNFWGIINLKLLLDVLFAVGFGLLLFSRVKEQRTLWLLRGYLFLVSSAWFIQRYAYLPLTSKLIDAVVLACSLSLAILWQ GELRRLMELLGTGRLAVLLGNPQKEFRATSTTITQLVDTAGKLSQNRRGALIVVDLGSDLRPEDFLYSGTNIEAQLSTDL LINLFATDTPLHDGAVLVKGNKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP ITSSRLQELLVNLIGNQNTIGTNKSTLGKNSLSQNTKSSDNIINDSNEKEKEKPAIFFNKND
Sequences:
>Translated_302_residues MNFWGIINLKLLLDVLFAVGFGLLLFSRVKEQRTLWLLRGYLFLVSSAWFIQRYAYLPLTSKLIDAVVLACSLSLAILWQ GELRRLMELLGTGRLAVLLGNPQKEFRATSTTITQLVDTAGKLSQNRRGALIVVDLGSDLRPEDFLYSGTNIEAQLSTDL LINLFATDTPLHDGAVLVKGNKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP ITSSRLQELLVNLIGNQNTIGTNKSTLGKNSLSQNTKSSDNIINDSNEKEKEKPAIFFNKND >Mature_302_residues MNFWGIINLKLLLDVLFAVGFGLLLFSRVKEQRTLWLLRGYLFLVSSAWFIQRYAYLPLTSKLIDAVVLACSLSLAILWQ GELRRLMELLGTGRLAVLLGNPQKEFRATSTTITQLVDTAGKLSQNRRGALIVVDLGSDLRPEDFLYSGTNIEAQLSTDL LINLFATDTPLHDGAVLVKGNKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP ITSSRLQELLVNLIGNQNTIGTNKSTLGKNSLSQNTKSSDNIINDSNEKEKEKPAIFFNKND
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 33379; Mature: 33379
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFWGIINLKLLLDVLFAVGFGLLLFSRVKEQRTLWLLRGYLFLVSSAWFIQRYAYLPLT CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SKLIDAVVLACSLSLAILWQGELRRLMELLGTGRLAVLLGNPQKEFRATSTTITQLVDTA HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHH GKLSQNRRGALIVVDLGSDLRPEDFLYSGTNIEAQLSTDLLINLFATDTPLHDGAVLVKG HHHCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEECCCEEEEEEECCCCCCCCEEEEEC NKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP CEEEECCEEEEECHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCCCCC ITSSRLQELLVNLIGNQNTIGTNKSTLGKNSLSQNTKSSDNIINDSNEKEKEKPAIFFNK CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCEEEEEC ND CC >Mature Secondary Structure MNFWGIINLKLLLDVLFAVGFGLLLFSRVKEQRTLWLLRGYLFLVSSAWFIQRYAYLPLT CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SKLIDAVVLACSLSLAILWQGELRRLMELLGTGRLAVLLGNPQKEFRATSTTITQLVDTA HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHH GKLSQNRRGALIVVDLGSDLRPEDFLYSGTNIEAQLSTDLLINLFATDTPLHDGAVLVKG HHHCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEECCCEEEEEEECCCCCCCCEEEEEC NKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP CEEEECCEEEEECHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCCCCC ITSSRLQELLVNLIGNQNTIGTNKSTLGKNSLSQNTKSSDNIINDSNEKEKEKPAIFFNK CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCEEEEEC ND CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]