Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is ybbP [H]

Identifier: 123968730

GI number: 123968730

Start: 1014205

End: 1015113

Strand: Direct

Name: ybbP [H]

Synonym: A9601_11971

Alternate gene names: 123968730

Gene position: 1014205-1015113 (Clockwise)

Preceding gene: 123968729

Following gene: 123968731

Centisome position: 60.73

GC content: 34.1

Gene sequence:

>909_bases
GTGAATTTCTGGGGAATTATAAATTTAAAGCTTTTATTAGATGTCTTATTTGCTGTTGGTTTCGGACTTTTATTATTCTC
TAGAGTAAAAGAACAAAGGACATTGTGGCTTCTAAGGGGATATTTGTTTTTAGTTTCATCTGCATGGTTTATTCAAAGAT
ATGCATACTTACCACTAACATCAAAATTAATTGATGCCGTAGTTCTAGCATGCTCTCTCTCATTAGCGATCCTTTGGCAA
GGAGAGTTAAGAAGATTAATGGAACTTTTAGGCACTGGGAGGCTTGCCGTATTACTCGGAAATCCACAAAAGGAATTTAG
AGCAACTTCAACTACTATTACTCAATTAGTTGATACTGCAGGTAAACTCTCTCAAAATAGAAGGGGAGCTTTAATTGTTG
TAGATTTGGGGAGTGACTTAAGACCAGAAGATTTTTTATATTCAGGCACTAATATTGAGGCACAATTATCAACTGACCTT
TTAATAAATCTATTTGCAACAGATACACCCTTACATGATGGAGCTGTTCTTGTGAAAGGGAATAAAATAATATCTGCCGG
GGTAATACTCCCTTTATCTAGACAAGGAATAAGTAGATACGGGACAAGACATCTTGCTGCACTAGGAATTACGGAAAGAT
TTGACAGATGTATTTGTATTGTTGTCTCTGAAGAGACAGGTACATTATCACTAGCAAACCAAGGGAAACTAGAAAGACCA
ATTACCAGTAGCAGGTTACAAGAACTTCTTGTAAATTTGATTGGTAATCAAAACACAATTGGAACGAATAAATCAACTTT
AGGTAAAAACTCTTTATCCCAAAATACAAAATCAAGTGATAATATTATCAATGATTCTAATGAGAAAGAGAAGGAAAAGC
CAGCAATTTTTTTTAACAAAAATGATTAA

Upstream 100 bases:

>100_bases
CAAAAAAGAGAAAGTCCATTTGATCTTTTAAGATATGATGTTTTGCCTGATCGCTTTATTAAACAAAATTAGGTACATTT
AAATTAATGTTGTTTTTAGT

Downstream 100 bases:

>100_bases
ATTATGAGTTTAGGAAAAATAATTGACGCGAAAAATAATAACTTATCCATGAAAATAGATAAGCAAAAAGTTCCAGAACA
TGTTGCAATAATAATGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNFWGIINLKLLLDVLFAVGFGLLLFSRVKEQRTLWLLRGYLFLVSSAWFIQRYAYLPLTSKLIDAVVLACSLSLAILWQ
GELRRLMELLGTGRLAVLLGNPQKEFRATSTTITQLVDTAGKLSQNRRGALIVVDLGSDLRPEDFLYSGTNIEAQLSTDL
LINLFATDTPLHDGAVLVKGNKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP
ITSSRLQELLVNLIGNQNTIGTNKSTLGKNSLSQNTKSSDNIINDSNEKEKEKPAIFFNKND

Sequences:

>Translated_302_residues
MNFWGIINLKLLLDVLFAVGFGLLLFSRVKEQRTLWLLRGYLFLVSSAWFIQRYAYLPLTSKLIDAVVLACSLSLAILWQ
GELRRLMELLGTGRLAVLLGNPQKEFRATSTTITQLVDTAGKLSQNRRGALIVVDLGSDLRPEDFLYSGTNIEAQLSTDL
LINLFATDTPLHDGAVLVKGNKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP
ITSSRLQELLVNLIGNQNTIGTNKSTLGKNSLSQNTKSSDNIINDSNEKEKEKPAIFFNKND
>Mature_302_residues
MNFWGIINLKLLLDVLFAVGFGLLLFSRVKEQRTLWLLRGYLFLVSSAWFIQRYAYLPLTSKLIDAVVLACSLSLAILWQ
GELRRLMELLGTGRLAVLLGNPQKEFRATSTTITQLVDTAGKLSQNRRGALIVVDLGSDLRPEDFLYSGTNIEAQLSTDL
LINLFATDTPLHDGAVLVKGNKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP
ITSSRLQELLVNLIGNQNTIGTNKSTLGKNSLSQNTKSSDNIINDSNEKEKEKPAIFFNKND

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 33379; Mature: 33379

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFWGIINLKLLLDVLFAVGFGLLLFSRVKEQRTLWLLRGYLFLVSSAWFIQRYAYLPLT
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SKLIDAVVLACSLSLAILWQGELRRLMELLGTGRLAVLLGNPQKEFRATSTTITQLVDTA
HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
GKLSQNRRGALIVVDLGSDLRPEDFLYSGTNIEAQLSTDLLINLFATDTPLHDGAVLVKG
HHHCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEECCCEEEEEEECCCCCCCCEEEEEC
NKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP
CEEEECCEEEEECHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCCCCC
ITSSRLQELLVNLIGNQNTIGTNKSTLGKNSLSQNTKSSDNIINDSNEKEKEKPAIFFNK
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCEEEEEC
ND
CC
>Mature Secondary Structure
MNFWGIINLKLLLDVLFAVGFGLLLFSRVKEQRTLWLLRGYLFLVSSAWFIQRYAYLPLT
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SKLIDAVVLACSLSLAILWQGELRRLMELLGTGRLAVLLGNPQKEFRATSTTITQLVDTA
HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
GKLSQNRRGALIVVDLGSDLRPEDFLYSGTNIEAQLSTDLLINLFATDTPLHDGAVLVKG
HHHCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEECCCEEEEEEECCCCCCCCEEEEEC
NKIISAGVILPLSRQGISRYGTRHLAALGITERFDRCICIVVSEETGTLSLANQGKLERP
CEEEECCEEEEECHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCCCCC
ITSSRLQELLVNLIGNQNTIGTNKSTLGKNSLSQNTKSSDNIINDSNEKEKEKPAIFFNK
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCEEEEEC
ND
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]