| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968684
Identifier: 123968684
GI number: 123968684
Start: 965746
End: 966975
Strand: Reverse
Name: 123968684
Synonym: A9601_11511
Alternate gene names: NA
Gene position: 966975-965746 (Counterclockwise)
Preceding gene: 123968686
Following gene: 123968682
Centisome position: 57.91
GC content: 30.0
Gene sequence:
>1230_bases GTGATTAGTCCAAATAGTTTACAAATTAGCAAAAATTGGTGGATTCAATTTCCTTATCATTTGAGGTTAATAACTAAGAT AAGATTTTTCGCTGCATTTGGAGCAGGAGGTGTTATTTATTTAACATCACTTATTTTTAATAACCTAGGATTATCGGCGA CAGATATTGGCCTGGGATTTACCATTTCAGCAATAATTGGAACCGTAACAAGACTCTTTACAGGTAATTATCTTAATAAA ACGGGAAAAATACAATTTCCGATAATTACTTCTTCAATACTAAGTATTGCCGCTAGCTTATGCCTCATTTTTTCAAGAGA TACTTTTTTGTACATAATTGGGCAATCACTTGTTGGGGCTGCTGCAGGAATATATTGGCCTGCTGCCGAGTTTGGGGTGC CCTATTTTTGTCATCCTATCGAAACACGTAAAGCTTATGCCCTTGTTAGAAGTTCGGAAGCTTTAGGAATATTTCTAGGG GTATTCTTAGGAGGGTATATGACAAATTTTTTGTATTTTAAATCAATATTTATAAATGATATATTTTGCATGTTAGTTAT CACGTATTTAATATCTAGAAATAGTTCTTCTATAAAAAGAAACTTAGAAAATTTTCAAAAAAAATTAGTAGATCCAATTA ATCAGGGACAATTGAAATGGAATAAAAATTCAACAATAATAATTTTATCTATTTTATTGATAACTACCTCTTTAGCCCTT ATACAAGTAACTTTGCCTCTGGATCTTGTTAAAGGTGGAGTATATCGTAATGCATTAAACAAAGAAATTATTAGTCTTAT AATTTCTATTCAGTTAATTTTATTGTTGTTTTTACAATGGCCTATCGGTTCTTGGATATCTAAGAAAGAAAGATTATTTG GCTTGAAATTTAGTTTAATAAATTTCTCTTTCGCTTCATTTTTATTATTTATTTCTAGTTATTTAAATATCCCAGCGTTT TATTTAATTTCTTTGGCATTAATTTTAGTAAGTTTAGGGACTGCTTCATTTCTTCCAACATCAACAGATGTCGTTTTCAG AATAGCTCCTTCAAATAAAAAAGGTTTTGCACTCGCTTTATTATCACAATGTTTCGCTATGGGTTATTTTTTCGGACCAT TTATTTCAGGACGCATATTAGATCTATTTGGTTATGCTTCATTAATCTGGCTTTCAATTTCTTGTTGTTGCTTTATTGCC TTTACAATTCTATTTAAGAGATTATTTTAA
Upstream 100 bases:
>100_bases ATCTCTTCAAACTTAATATTTATCTTTTCAGCAGCCTTTAAACCATTATTAAAAAATAAACCACAAAAACTAAAAAAAAT TATAAAAATGTATTTCACTA
Downstream 100 bases:
>100_bases TTAATCTTTTCTAATTCAATAATTCTTCTCTCTCTTAGAAATAAGAAAAAAGGTGCAGAGAATGCGAAGGCTATAAGAAA AGTTCCAATGTATACAACCC
Product: major facilitator superfamily multidrug-efflux transporter
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Permease Facilitator Superfamily; Transporter Facilitator Family Protein; Facilitator Superfamily Multidrug-Efflux Transporter-Like
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MISPNSLQISKNWWIQFPYHLRLITKIRFFAAFGAGGVIYLTSLIFNNLGLSATDIGLGFTISAIIGTVTRLFTGNYLNK TGKIQFPIITSSILSIAASLCLIFSRDTFLYIIGQSLVGAAAGIYWPAAEFGVPYFCHPIETRKAYALVRSSEALGIFLG VFLGGYMTNFLYFKSIFINDIFCMLVITYLISRNSSSIKRNLENFQKKLVDPINQGQLKWNKNSTIIILSILLITTSLAL IQVTLPLDLVKGGVYRNALNKEIISLIISIQLILLLFLQWPIGSWISKKERLFGLKFSLINFSFASFLLFISSYLNIPAF YLISLALILVSLGTASFLPTSTDVVFRIAPSNKKGFALALLSQCFAMGYFFGPFISGRILDLFGYASLIWLSISCCCFIA FTILFKRLF
Sequences:
>Translated_409_residues MISPNSLQISKNWWIQFPYHLRLITKIRFFAAFGAGGVIYLTSLIFNNLGLSATDIGLGFTISAIIGTVTRLFTGNYLNK TGKIQFPIITSSILSIAASLCLIFSRDTFLYIIGQSLVGAAAGIYWPAAEFGVPYFCHPIETRKAYALVRSSEALGIFLG VFLGGYMTNFLYFKSIFINDIFCMLVITYLISRNSSSIKRNLENFQKKLVDPINQGQLKWNKNSTIIILSILLITTSLAL IQVTLPLDLVKGGVYRNALNKEIISLIISIQLILLLFLQWPIGSWISKKERLFGLKFSLINFSFASFLLFISSYLNIPAF YLISLALILVSLGTASFLPTSTDVVFRIAPSNKKGFALALLSQCFAMGYFFGPFISGRILDLFGYASLIWLSISCCCFIA FTILFKRLF >Mature_409_residues MISPNSLQISKNWWIQFPYHLRLITKIRFFAAFGAGGVIYLTSLIFNNLGLSATDIGLGFTISAIIGTVTRLFTGNYLNK TGKIQFPIITSSILSIAASLCLIFSRDTFLYIIGQSLVGAAAGIYWPAAEFGVPYFCHPIETRKAYALVRSSEALGIFLG VFLGGYMTNFLYFKSIFINDIFCMLVITYLISRNSSSIKRNLENFQKKLVDPINQGQLKWNKNSTIIILSILLITTSLAL IQVTLPLDLVKGGVYRNALNKEIISLIISIQLILLLFLQWPIGSWISKKERLFGLKFSLINFSFASFLLFISSYLNIPAF YLISLALILVSLGTASFLPTSTDVVFRIAPSNKKGFALALLSQCFAMGYFFGPFISGRILDLFGYASLIWLSISCCCFIA FTILFKRLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45641; Mature: 45641
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPNSLQISKNWWIQFPYHLRLITKIRFFAAFGAGGVIYLTSLIFNNLGLSATDIGLGF CCCCCCEEEECCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCHH TISAIIGTVTRLFTGNYLNKTGKIQFPIITSSILSIAASLCLIFSRDTFLYIIGQSLVGA HHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHH AAGIYWPAAEFGVPYFCHPIETRKAYALVRSSEALGIFLGVFLGGYMTNFLYFKSIFIND HHHHCCCHHHCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IFCMLVITYLISRNSSSIKRNLENFQKKLVDPINQGQLKWNKNSTIIILSILLITTSLAL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEHHHHHHHHHHHHHH IQVTLPLDLVKGGVYRNALNKEIISLIISIQLILLLFLQWPIGSWISKKERLFGLKFSLI HEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH NFSFASFLLFISSYLNIPAFYLISLALILVSLGTASFLPTSTDVVFRIAPSNKKGFALAL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHH LSQCFAMGYFFGPFISGRILDLFGYASLIWLSISCCCFIAFTILFKRLF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MISPNSLQISKNWWIQFPYHLRLITKIRFFAAFGAGGVIYLTSLIFNNLGLSATDIGLGF CCCCCCEEEECCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCHH TISAIIGTVTRLFTGNYLNKTGKIQFPIITSSILSIAASLCLIFSRDTFLYIIGQSLVGA HHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHH AAGIYWPAAEFGVPYFCHPIETRKAYALVRSSEALGIFLGVFLGGYMTNFLYFKSIFIND HHHHCCCHHHCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IFCMLVITYLISRNSSSIKRNLENFQKKLVDPINQGQLKWNKNSTIIILSILLITTSLAL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEHHHHHHHHHHHHHH IQVTLPLDLVKGGVYRNALNKEIISLIISIQLILLLFLQWPIGSWISKKERLFGLKFSLI HEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH NFSFASFLLFISSYLNIPAFYLISLALILVSLGTASFLPTSTDVVFRIAPSNKKGFALAL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHH LSQCFAMGYFFGPFISGRILDLFGYASLIWLSISCCCFIAFTILFKRLF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA