| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968587
Identifier: 123968587
GI number: 123968587
Start: 915211
End: 916005
Strand: Direct
Name: 123968587
Synonym: A9601_10541
Alternate gene names: NA
Gene position: 915211-916005 (Clockwise)
Preceding gene: 123968586
Following gene: 123968591
Centisome position: 54.81
GC content: 25.16
Gene sequence:
>795_bases ATGAATTTAAGAAAATATCTAAAAGTTTATAAAAAATTCTTACATACTTCTTTGGCTTCTGAATTGGAGTATAAGACAAA TATATTAGTTGATTTAACTACTGCAATTTTAAGTTTAGTAGGGAGTATTTTTCTTTTATCTATTTTTTTTCAAAATAATG GAAATATTGGGGGATGGGAATTTGAACAGGCACTAATAATTCAAGGCATTTATACAATTTTGAATGGAATAACAAATACA TGGTTCAATCCTAATCTTACAGAAATAGTTAAACATATAAGAGAAGGAACATTAGACTTCGTACTTTTAAAACCTATTGA TAGTCAATTTTTCATTTCATTAAAAAAAATAAATCCATCTGGATTTTTAGAAATAATGCTTGGATTTTTCTTGTTGTTAT TCTGCATGAGAATAAATCAAATAAATTTAAATTTAAGTTTTCTAACATTATCGTTAATTACGATAAGCTGCTCGATTTGT ATTTTATATAGTCTATGGTTTTTTATTTCTACTACTACTATTTGGTTTGTTAAGACTTGGAATGCAATAGAAGTATTAAG ATCATTTCTTTATATTGGAAGATTTCCTCTAAATTCATTTTCATTTTCTTTAAGAATATTTTTTAGTGTTTTCATTCCTA TTGCTTTTATAACTACAATTCCTTCTGAAGTTTTTCTAGGCTTTTCTCAATTATGGAAAATAATGCTTGAAGTTATTGTT GCTTCAGTATTTCTTATAACTTCAAGAAAATTCTGGTTATTTGCATTAAAGTTCTATTCATCAGCATCTAGCTAA
Upstream 100 bases:
>100_bases GTGGAGGCTTAAGTATGCAAATTCTATGGATTTTTTTACTTTTCCCACTTTTTAAGAAAATCTGGTCTGAAGGAACCAAA AAATATACAGCTATGGGGTC
Downstream 100 bases:
>100_bases CTACTATTTAATGACCTCCCTGCAAAATTCCCAAATTTGTTGTTTACTTTTCAGATTAGAAAGTCTAGATAATTTCTTAA AATAAGGTTTAGATTTTTCG
Product: membrane protein, multidrug efflux associated
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNLRKYLKVYKKFLHTSLASELEYKTNILVDLTTAILSLVGSIFLLSIFFQNNGNIGGWEFEQALIIQGIYTILNGITNT WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCMRINQINLNLSFLTLSLITISCSIC ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGFSQLWKIMLEVIV ASVFLITSRKFWLFALKFYSSASS
Sequences:
>Translated_264_residues MNLRKYLKVYKKFLHTSLASELEYKTNILVDLTTAILSLVGSIFLLSIFFQNNGNIGGWEFEQALIIQGIYTILNGITNT WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCMRINQINLNLSFLTLSLITISCSIC ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGFSQLWKIMLEVIV ASVFLITSRKFWLFALKFYSSASS >Mature_264_residues MNLRKYLKVYKKFLHTSLASELEYKTNILVDLTTAILSLVGSIFLLSIFFQNNGNIGGWEFEQALIIQGIYTILNGITNT WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCMRINQINLNLSFLTLSLITISCSIC ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGFSQLWKIMLEVIV ASVFLITSRKFWLFALKFYSSASS
Specific function: Unknown
COG id: COG3694
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30525; Mature: 30525
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRKYLKVYKKFLHTSLASELEYKTNILVDLTTAILSLVGSIFLLSIFFQNNGNIGGWE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH FEQALIIQGIYTILNGITNTWFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCHHHEEEEEECCCC GFLEIMLGFFLLLFCMRINQINLNLSFLTLSLITISCSICILYSLWFFISTTTIWFVKTW HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC NAIEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGFSQLWKIMLEVIV CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ASVFLITSRKFWLFALKFYSSASS HHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNLRKYLKVYKKFLHTSLASELEYKTNILVDLTTAILSLVGSIFLLSIFFQNNGNIGGWE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH FEQALIIQGIYTILNGITNTWFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCHHHEEEEEECCCC GFLEIMLGFFLLLFCMRINQINLNLSFLTLSLITISCSICILYSLWFFISTTTIWFVKTW HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC NAIEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGFSQLWKIMLEVIV CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ASVFLITSRKFWLFALKFYSSASS HHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA