| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968539
Identifier: 123968539
GI number: 123968539
Start: 872807
End: 873172
Strand: Reverse
Name: 123968539
Synonym: A9601_10061
Alternate gene names: NA
Gene position: 873172-872807 (Counterclockwise)
Preceding gene: 123968541
Following gene: 123968538
Centisome position: 52.29
GC content: 28.69
Gene sequence:
>366_bases ATGCCCTCTCCGAGGAAAAGAATTGGTTTTTTGCCAAGTGAAGAAGTGCATGAAATTATTGAAAAATTGTGCACAGCTAA TGAGTTTAGTCAGTCAAAAGTCACAGGATTATTGGTTGAGGAAGCGTTAAGGTCTAGAGGTGTGTTAAATAAATCTTATG GTCAAAATCAGAATAATAATAATGATTTAATAAACTTTTCTTTTGATCACGAATCATTTTCTGAAAATAATAGTTCTTCA CTTAATGTGGACGAATATGCAGTTGATAAAAAAGTATTATCTGATGATATCAAAATGATGCATGAATTTATTGAGTTTAA GTATTTTAAGAAAATTATGAAGCGAAATAACAACATTATTAAATAA
Upstream 100 bases:
>100_bases GACAGGAAATAATAAAATATGCATAGCAAAATTAGTTGACTTAAATCAAATATAGTGCAACACTTATAATGTGCAAGTGT CACACTAATTTTTTTTTATT
Downstream 100 bases:
>100_bases ATAGTGTCACACTATTAATGTTTATATAAGAATGCTTTTCAGTGGAATTTAGAAATTATGCAGAGATAAATATTTTTTAA GATTTCTAATCGATTTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MPSPRKRIGFLPSEEVHEIIEKLCTANEFSQSKVTGLLVEEALRSRGVLNKSYGQNQNNNNDLINFSFDHESFSENNSSS LNVDEYAVDKKVLSDDIKMMHEFIEFKYFKKIMKRNNNIIK
Sequences:
>Translated_121_residues MPSPRKRIGFLPSEEVHEIIEKLCTANEFSQSKVTGLLVEEALRSRGVLNKSYGQNQNNNNDLINFSFDHESFSENNSSS LNVDEYAVDKKVLSDDIKMMHEFIEFKYFKKIMKRNNNIIK >Mature_120_residues PSPRKRIGFLPSEEVHEIIEKLCTANEFSQSKVTGLLVEEALRSRGVLNKSYGQNQNNNNDLINFSFDHESFSENNSSSL NVDEYAVDKKVLSDDIKMMHEFIEFKYFKKIMKRNNNIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14063; Mature: 13932
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPRKRIGFLPSEEVHEIIEKLCTANEFSQSKVTGLLVEEALRSRGVLNKSYGQNQNNN CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC NDLINFSFDHESFSENNSSSLNVDEYAVDKKVLSDDIKMMHEFIEFKYFKKIMKRNNNII CCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC K C >Mature Secondary Structure PSPRKRIGFLPSEEVHEIIEKLCTANEFSQSKVTGLLVEEALRSRGVLNKSYGQNQNNN CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC NDLINFSFDHESFSENNSSSLNVDEYAVDKKVLSDDIKMMHEFIEFKYFKKIMKRNNNII CCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA