| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968538
Identifier: 123968538
GI number: 123968538
Start: 872386
End: 872538
Strand: Reverse
Name: 123968538
Synonym: A9601_10051
Alternate gene names: NA
Gene position: 872538-872386 (Counterclockwise)
Preceding gene: 123968539
Following gene: 123968537
Centisome position: 52.25
GC content: 27.45
Gene sequence:
>153_bases ATGGCTGTAAGTGAATTAAATGAAGATACACAGGATCAAATATGTGATCTTCTTGAAAATCTTCAGCAAATAGAGAAACT TAAAAATAAAGATATACGAATTTTGCTTGATAAGGTAGTAAGAAAATATGGAGGAAAAGTAGTAAATAAATGA
Upstream 100 bases:
>100_bases TTAGCCCGCTTTAAAAAAATAGCAATAAAAAAATATAATTACAACAAGTATGTAAATTTACTTTTGATTTAGAATTGGAT TATAAAAACTCTATATATTA
Downstream 100 bases:
>100_bases AACATCTATTAATCCCACTATTAGTTTTACTTCCTTTACCAAGTGTCGTAAATAGCTCCCACTTAAATAATCAGAGAGAA CTTATAGTCACCTCAGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MAVSELNEDTQDQICDLLENLQQIEKLKNKDIRILLDKVVRKYGGKVVNK
Sequences:
>Translated_50_residues MAVSELNEDTQDQICDLLENLQQIEKLKNKDIRILLDKVVRKYGGKVVNK >Mature_49_residues AVSELNEDTQDQICDLLENLQQIEKLKNKDIRILLDKVVRKYGGKVVNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5800; Mature: 5669
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSELNEDTQDQICDLLENLQQIEKLKNKDIRILLDKVVRKYGGKVVNK CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AVSELNEDTQDQICDLLENLQQIEKLKNKDIRILLDKVVRKYGGKVVNK CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA