Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968538

Identifier: 123968538

GI number: 123968538

Start: 872386

End: 872538

Strand: Reverse

Name: 123968538

Synonym: A9601_10051

Alternate gene names: NA

Gene position: 872538-872386 (Counterclockwise)

Preceding gene: 123968539

Following gene: 123968537

Centisome position: 52.25

GC content: 27.45

Gene sequence:

>153_bases
ATGGCTGTAAGTGAATTAAATGAAGATACACAGGATCAAATATGTGATCTTCTTGAAAATCTTCAGCAAATAGAGAAACT
TAAAAATAAAGATATACGAATTTTGCTTGATAAGGTAGTAAGAAAATATGGAGGAAAAGTAGTAAATAAATGA

Upstream 100 bases:

>100_bases
TTAGCCCGCTTTAAAAAAATAGCAATAAAAAAATATAATTACAACAAGTATGTAAATTTACTTTTGATTTAGAATTGGAT
TATAAAAACTCTATATATTA

Downstream 100 bases:

>100_bases
AACATCTATTAATCCCACTATTAGTTTTACTTCCTTTACCAAGTGTCGTAAATAGCTCCCACTTAAATAATCAGAGAGAA
CTTATAGTCACCTCAGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 50; Mature: 49

Protein sequence:

>50_residues
MAVSELNEDTQDQICDLLENLQQIEKLKNKDIRILLDKVVRKYGGKVVNK

Sequences:

>Translated_50_residues
MAVSELNEDTQDQICDLLENLQQIEKLKNKDIRILLDKVVRKYGGKVVNK
>Mature_49_residues
AVSELNEDTQDQICDLLENLQQIEKLKNKDIRILLDKVVRKYGGKVVNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5800; Mature: 5669

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSELNEDTQDQICDLLENLQQIEKLKNKDIRILLDKVVRKYGGKVVNK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AVSELNEDTQDQICDLLENLQQIEKLKNKDIRILLDKVVRKYGGKVVNK
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA