| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is metG [H]
Identifier: 123968528
GI number: 123968528
Start: 866496
End: 868040
Strand: Direct
Name: metG [H]
Synonym: A9601_09951
Alternate gene names: 123968528
Gene position: 866496-868040 (Clockwise)
Preceding gene: 123968527
Following gene: 123968529
Centisome position: 51.89
GC content: 30.23
Gene sequence:
>1545_bases ATGACTTTTGTCATTACTACACCTTTATACTATGTTAATGATAAACCTCATTTAGGAAGTGTATATACAACAATAATTTG TGACTCAATAGCTAGGTATAAAAGGCTTGCAGGTGAAGAAGTTATTTTCATCACTGGTGTCGATGAACATGGTTTAAAAA TACAAAGAACAGCTAATGAAAAGGGTATTCCTCCAAAATCACATTGTGATGAAATCTCAGAAATCTTTAATAATAATTGG AAAGATTGGAATATATCCTTTGACAAATTTATAAGAACAAGCTCAAAAAATCATGAATTTGTTGTTAATGAATTTTATGA AAGAGTAAAAGCATCAGATGATATCTATATGGGAGTTCAAAAAGGTTGGTATTGTGTCGGTTGCGAAGAATTTAAAGATA ATCCAGAAAATTCATCAACATACAAATGTCCCATACATCAAAAAAATCTTGAATGGAAAAATGAAGAGAATCTCTTTTTT AGGCTTTCAAAATATCAAAAAGAAATCGAGAAAATAATCAACGAACCTTCTTTTATAGAGCCAATAGAAAGAAAGAATGA AATTATAAATTTTGTTTCTAGAGGTTTAAAGGATTTTTCAATTTCAAGAACAAATGTTACATGGGGAATTCCAGTCCCTG GTTACGATAACCATACCTTTTATGTGTGGTTTGATGCTTTACTTGGATATGTAAGTGCCATTAGTTCTGATGCGACAGAA CATTCATTGGAAAAATCAATTAATGGAGGATGGCCAGCTGATGTTCATTTAATTGGTAAGGATATTCTGAGATTCCATGC TGTATATTGGCCTGCAATGCTCATTTCTGCCAAAATGAAAGTTCCTAAGAAGGTTTTTGGGCATGGGTTTCTTACAAGAG AGGGGCAAAAAATGGGTAAAAGCTTAGGAAATGTACTCGACCCTGATTTATTGCTTAAAAAATATGGAAATGATCCTGTA AGGTGGTACCTCATTAAAGACATATCATTAGGAAATGATGGGGATTTTCAAGATAAAAGATTTGTTGACATCATCAATAA TGACTTAGCTAATACAATAGGTAATTTATTAAATAGAACATCATCTATGTCTAGAAAATGGTTTGATAATAAAGTGCCAA ATAATGAAAAAATTTCAAGTGAAAATAAATTAGAGAATTATGCCAAAATTGCAGTTGAAAACTATATTTATAACTTTGAT AACTATAAATTAGATTTAGCAGCTAATGAAGTACTTAGCCTAGCAATTAATACAAATTTGTATTTGAATGATAATCAGCC ATGGGTGCTAATAAAAGAGAAAGATAATCTACCTCTAGTTAAAGAAATTATTTATAACGTTTTAGAAAGTACCAGAATAA TAGGATTATTATTACTACCTTTATTGCCCGAATTATCTATAAAAATTAATGAACAACTTGGCTCTATATACAGAGAGGAG ATTTCTTGGAAAAAACAATTAATTTGGGGATTATTAGTTAGCAACTCAAGTCTTCCTAAACCCACTCCAATCATAAATAA ACTTGAGTATGAGCAAAAATTATAG
Upstream 100 bases:
>100_bases ATGATAGTAATCTTTTAGAATTTATTTATTAATAAGATAATCAATATAATGGGTTATTATTAGTTTAAAAAATATCTGTT AGTATAAATATAAAAGCTTT
Downstream 100 bases:
>100_bases ATTAATAATTTTCCTTACATTATTTATGCTTGGTTGCTCTCCAAGTGTAATTGATGAAAAAAAAGTTATCCAAAAAATAG ACAGTTTAGATATGACTATA
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MTFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEEVIFITGVDEHGLKIQRTANEKGIPPKSHCDEISEIFNNNW KDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQKGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFF RLSKYQKEIEKIINEPSFIEPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSDATE HSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKMGKSLGNVLDPDLLLKKYGNDPV RWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLNRTSSMSRKWFDNKVPNNEKISSENKLENYAKIAVENYIYNFD NYKLDLAANEVLSLAINTNLYLNDNQPWVLIKEKDNLPLVKEIIYNVLESTRIIGLLLLPLLPELSIKINEQLGSIYREE ISWKKQLIWGLLVSNSSLPKPTPIINKLEYEQKL
Sequences:
>Translated_514_residues MTFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEEVIFITGVDEHGLKIQRTANEKGIPPKSHCDEISEIFNNNW KDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQKGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFF RLSKYQKEIEKIINEPSFIEPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSDATE HSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKMGKSLGNVLDPDLLLKKYGNDPV RWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLNRTSSMSRKWFDNKVPNNEKISSENKLENYAKIAVENYIYNFD NYKLDLAANEVLSLAINTNLYLNDNQPWVLIKEKDNLPLVKEIIYNVLESTRIIGLLLLPLLPELSIKINEQLGSIYREE ISWKKQLIWGLLVSNSSLPKPTPIINKLEYEQKL >Mature_513_residues TFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEEVIFITGVDEHGLKIQRTANEKGIPPKSHCDEISEIFNNNWK DWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQKGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFFR LSKYQKEIEKIINEPSFIEPIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSDATEH SLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKMGKSLGNVLDPDLLLKKYGNDPVR WYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLNRTSSMSRKWFDNKVPNNEKISSENKLENYAKIAVENYIYNFDN YKLDLAANEVLSLAINTNLYLNDNQPWVLIKEKDNLPLVKEIIYNVLESTRIIGLLLLPLLPELSIKINEQLGSIYREEI SWKKQLIWGLLVSNSSLPKPTPIINKLEYEQKL
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2A subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=501, Percent_Identity=34.3313373253493, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI14043022, Length=520, Percent_Identity=25.5769230769231, Blast_Score=155, Evalue=1e-37, Organism=Escherichia coli, GI1788432, Length=514, Percent_Identity=26.4591439688716, Blast_Score=186, Evalue=2e-48, Organism=Caenorhabditis elegans, GI212645096, Length=504, Percent_Identity=30.952380952381, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI71992781, Length=344, Percent_Identity=30.5232558139535, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17540794, Length=555, Percent_Identity=24.8648648648649, Blast_Score=147, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6321610, Length=511, Percent_Identity=34.0508806262231, Blast_Score=256, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6321704, Length=521, Percent_Identity=23.8003838771593, Blast_Score=123, Evalue=9e-29, Organism=Drosophila melanogaster, GI21358483, Length=489, Percent_Identity=30.6748466257669, Blast_Score=276, Evalue=3e-74, Organism=Drosophila melanogaster, GI24655311, Length=548, Percent_Identity=27.1897810218978, Blast_Score=173, Evalue=2e-43,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 59432; Mature: 59300
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEEVIFITGVDEHGLKIQRTANE CEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCC KGIPPKSHCDEISEIFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQ CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEC KGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFFRLSKYQKEIEKIINEPSFIE CCEEEEECHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCC PIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSDATE HHHHHHHHHHHHHCCCHHCEEEECEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCHHH HSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKMGK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH SLGNVLDPDLLLKKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLNRT HHHCCCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SSMSRKWFDNKVPNNEKISSENKLENYAKIAVENYIYNFDNYKLDLAANEVLSLAINTNL HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEECCCEEEEEEECEE YLNDNQPWVLIKEKDNLPLVKEIIYNVLESTRIIGLLLLPLLPELSIKINEQLGSIYREE EECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH ISWKKQLIWGLLVSNSSLPKPTPIINKLEYEQKL HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEEVIFITGVDEHGLKIQRTANE EEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCC KGIPPKSHCDEISEIFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQ CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEC KGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFFRLSKYQKEIEKIINEPSFIE CCEEEEECHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCC PIERKNEIINFVSRGLKDFSISRTNVTWGIPVPGYDNHTFYVWFDALLGYVSAISSDATE HHHHHHHHHHHHHCCCHHCEEEECEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCHHH HSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKMGK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH SLGNVLDPDLLLKKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLNRT HHHCCCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SSMSRKWFDNKVPNNEKISSENKLENYAKIAVENYIYNFDNYKLDLAANEVLSLAINTNL HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEECCCEEEEEEECEE YLNDNQPWVLIKEKDNLPLVKEIIYNVLESTRIIGLLLLPLLPELSIKINEQLGSIYREE EECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH ISWKKQLIWGLLVSNSSLPKPTPIINKLEYEQKL HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]