| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968508
Identifier: 123968508
GI number: 123968508
Start: 844067
End: 844693
Strand: Direct
Name: 123968508
Synonym: A9601_09751
Alternate gene names: NA
Gene position: 844067-844693 (Clockwise)
Preceding gene: 123968507
Following gene: 123968509
Centisome position: 50.55
GC content: 26.32
Gene sequence:
>627_bases ATGGAAACTAATTACAGACTACCTAAAGATTTAAATGAATCTCTTAAGAATATGGAGGATGCAATTATTCCAAGTTTATT AGATTCAAATAAAAGATTTACTATAGAATTTAATTTTGAAGGATTGAAATTTAACAGAATTGGAATAACTATCTACAAGA TATTGTCTAAAAATAATAATGTATTCATAACATTTGCTGATCAAGGTGCTGTGGCTTTGGCTCAAAGAGACTATCCAGAT ATCAAAGATAAAATCTTTACTTTTAAATCATTTAATGAATCAAATAATATAAATAATATTGATAGTGCAATGATATCGAT ACTACCTCAGCCATATGATTTCGATTCATTTGAACCAATGTCTGATAATTATCAAGGTACGCATTATTCATTAAATCCAA AATTTGAAGATGCCAATATTGGTATAGGAAGTGTTATAAGAGAGCGACGTAAAAACTTTGTCAAAACATGGAAAAATATT TATTTTCTGCAGCCTTTAAATAAAGCTGCTCTTATGCATATATATCCAAATAACTGGTTGCTTTTCAAAGAAGAAAATAA AAGATATTTTTTTAAAAAAGAATTTGAAATTAAACCCGACAATGAATCTATTTTTGTAAATTTATAG
Upstream 100 bases:
>100_bases AACTATATTCAAATATTCGTGTTACTTTAGGTTCAATAAACAATAAGTCAGAAATAGATAAATTTTTAGAACTTATTCAA ATATGTATTGACAAATTTTA
Downstream 100 bases:
>100_bases ATTGAATGTGATAAAAAAAATATTTTCATTTTTATTTATTGTTCTTGTATTAGTAACATTTCCTTTCTTAATAAGATATT TACTAGCAAATCAGAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues METNYRLPKDLNESLKNMEDAIIPSLLDSNKRFTIEFNFEGLKFNRIGITIYKILSKNNNVFITFADQGAVALAQRDYPD IKDKIFTFKSFNESNNINNIDSAMISILPQPYDFDSFEPMSDNYQGTHYSLNPKFEDANIGIGSVIRERRKNFVKTWKNI YFLQPLNKAALMHIYPNNWLLFKEENKRYFFKKEFEIKPDNESIFVNL
Sequences:
>Translated_208_residues METNYRLPKDLNESLKNMEDAIIPSLLDSNKRFTIEFNFEGLKFNRIGITIYKILSKNNNVFITFADQGAVALAQRDYPD IKDKIFTFKSFNESNNINNIDSAMISILPQPYDFDSFEPMSDNYQGTHYSLNPKFEDANIGIGSVIRERRKNFVKTWKNI YFLQPLNKAALMHIYPNNWLLFKEENKRYFFKKEFEIKPDNESIFVNL >Mature_208_residues METNYRLPKDLNESLKNMEDAIIPSLLDSNKRFTIEFNFEGLKFNRIGITIYKILSKNNNVFITFADQGAVALAQRDYPD IKDKIFTFKSFNESNNINNIDSAMISILPQPYDFDSFEPMSDNYQGTHYSLNPKFEDANIGIGSVIRERRKNFVKTWKNI YFLQPLNKAALMHIYPNNWLLFKEENKRYFFKKEFEIKPDNESIFVNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24543; Mature: 24543
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METNYRLPKDLNESLKNMEDAIIPSLLDSNKRFTIEFNFEGLKFNRIGITIYKILSKNNN CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEEEEECCCCC VFITFADQGAVALAQRDYPDIKDKIFTFKSFNESNNINNIDSAMISILPQPYDFDSFEPM EEEEECCCCEEEEECCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC SDNYQGTHYSLNPKFEDANIGIGSVIRERRKNFVKTWKNIYFLQPLNKAALMHIYPNNWL CCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEE LFKEENKRYFFKKEFEIKPDNESIFVNL EEEECCCEEEEEEEEEECCCCCEEEEEC >Mature Secondary Structure METNYRLPKDLNESLKNMEDAIIPSLLDSNKRFTIEFNFEGLKFNRIGITIYKILSKNNN CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEEEEECCCCC VFITFADQGAVALAQRDYPDIKDKIFTFKSFNESNNINNIDSAMISILPQPYDFDSFEPM EEEEECCCCEEEEECCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC SDNYQGTHYSLNPKFEDANIGIGSVIRERRKNFVKTWKNIYFLQPLNKAALMHIYPNNWL CCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEE LFKEENKRYFFKKEFEIKPDNESIFVNL EEEECCCEEEEEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA