Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is rsbW

Identifier: 123968470

GI number: 123968470

Start: 806613

End: 807047

Strand: Direct

Name: rsbW

Synonym: A9601_09371

Alternate gene names: NA

Gene position: 806613-807047 (Clockwise)

Preceding gene: 123968469

Following gene: 123968474

Centisome position: 48.3

GC content: 28.05

Gene sequence:

>435_bases
ATGTCCTTATTCCGGGGCAAAAATATTTTAAAAAGATTTTTTAAAAGACCAAAAATTGACTGGTCAAACTACGAATTCGA
ATCATCATTACAATTAAATGAATTTGTCGATCAATTATTAGAACCTATTAAAAATACTCAATCAAGCTATCTTATAAAAC
TTGGTTTACATGAAGCTCTAGTTAATGCAGTAAAACATGGAAATAAATTAGATCCTAAAAAAAATATTAGAGTAAGAAGA
ATAATTACTCCTAATTGGTGTGTTTGGCAAATTCAAGATCAAGGTAATGGTTTAGAAATAAAAAAAAGAGACTACACATT
ACCAAAAAAAATAAATAGTGTAAATGGGCGTGGCCTATACATTATTAATGAATGTTTTGATGATATTAGATGGAGTAGTA
AAGGTAATAGGCTTCAGTTGGCTTTAAAAAGGTGA

Upstream 100 bases:

>100_bases
CTCCATCCTACGGCATCCTGCTATTGCGAAGAGACACAATAATATTCTTTAAAATGAGGTATTTAATAAGTTAAAATTAA
GATAGTGTAAAAATATTATT

Downstream 100 bases:

>100_bases
TTTTTACTAGGGCAAGGTTGATCTACGTTTATTTCTTTTAACCATTTAACACTTTCTTCTATATACTCAATAGATTCCTT
TTCATTGCAAGAAATAATTA

Product: anti-sigma regulatory factor (Ser/Thr protein kinase)

Products: NA

Alternate protein names: PmgA Protein; Photomixotrophic Growth Related Protein PmgA-Like Protein; Photomixotrophic Growth-Like Protein PmgA; Photomixotrophic Growth Related Protein

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSLFRGKNILKRFFKRPKIDWSNYEFESSLQLNEFVDQLLEPIKNTQSSYLIKLGLHEALVNAVKHGNKLDPKKNIRVRR
IITPNWCVWQIQDQGNGLEIKKRDYTLPKKINSVNGRGLYIINECFDDIRWSSKGNRLQLALKR

Sequences:

>Translated_144_residues
MSLFRGKNILKRFFKRPKIDWSNYEFESSLQLNEFVDQLLEPIKNTQSSYLIKLGLHEALVNAVKHGNKLDPKKNIRVRR
IITPNWCVWQIQDQGNGLEIKKRDYTLPKKINSVNGRGLYIINECFDDIRWSSKGNRLQLALKR
>Mature_143_residues
SLFRGKNILKRFFKRPKIDWSNYEFESSLQLNEFVDQLLEPIKNTQSSYLIKLGLHEALVNAVKHGNKLDPKKNIRVRRI
ITPNWCVWQIQDQGNGLEIKKRDYTLPKKINSVNGRGLYIINECFDDIRWSSKGNRLQLALKR

Specific function: Unknown

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17001; Mature: 16870

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFRGKNILKRFFKRPKIDWSNYEFESSLQLNEFVDQLLEPIKNTQSSYLIKLGLHEAL
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
VNAVKHGNKLDPKKNIRVRRIITPNWCVWQIQDQGNGLEIKKRDYTLPKKINSVNGRGLY
HHHHHCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCCCCHHHCCCCCCEEE
IINECFDDIRWSSKGNRLQLALKR
EHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure 
SLFRGKNILKRFFKRPKIDWSNYEFESSLQLNEFVDQLLEPIKNTQSSYLIKLGLHEAL
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
VNAVKHGNKLDPKKNIRVRRIITPNWCVWQIQDQGNGLEIKKRDYTLPKKINSVNGRGLY
HHHHHCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCCCCHHHCCCCCCEEE
IINECFDDIRWSSKGNRLQLALKR
EHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA