| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968403
Identifier: 123968403
GI number: 123968403
Start: 752573
End: 753160
Strand: Reverse
Name: 123968403
Synonym: A9601_08701
Alternate gene names: NA
Gene position: 753160-752573 (Counterclockwise)
Preceding gene: 123968404
Following gene: 123968402
Centisome position: 45.1
GC content: 36.73
Gene sequence:
>588_bases ATGAATTTCCATAGTTATGGAGAACCCCCTTCAAAATTAGTAAGGATAATAACTGGACAATCTGTTTTAATAGACCCTTC ATCAAGGCCAAAAGGTACCTGCTTAGAAGTTGAGAGTGGAATTGCTAGGGTTTATTGCCCTTGTGAAGAAACTGAAGGAA TGACACTTGCATTTTTACAATCAGGTGATCAACTAAGAACGGATCTTTTATGTAGCGAAGGTGTTTGTGTTGAAGCATTA ACAGATTTGTCTTTTCATAGCAATGTAAATATTGATCAGAATATTGGTTTTGATGCAGTAAATGAATGGACTTTGCAACT CCTTAGGATAAGACACTTGGGAAATGCAGAACAGCGATTACAAGCATTGTTTTCAATACTAGTAAATCGTCTAGGTAGAA GATGTGGTCAATGGTGCGAGCTACCCTTTAGGTTAACGCACGAAAGGATTGGAGAATTAATCGGTTCTACACGCGTAACA TCAACTAGATTAATTTCTAAATTAAGATCATCTGAGTTATTAATAGCTCCAATTGGAACCCAAACAATCAGTGTTGCGCC TTCTTTTATTGAAACATCTCCGCTATAA
Upstream 100 bases:
>100_bases AAAGAAAAACTTCAAAAATAAGATGATAATGAGAATCTATTGCAATAAGTGATTTTATAGTGCATAATTGATAATAATTC TCATTATCATATTTAAATTA
Downstream 100 bases:
>100_bases AAACATGAAGGAATCACAATCACTTACAAACAACTTGTTAATGGAAGTTGATTTTTTATCGAATAGACTCAGAAATATCA AGCAATCCTACAAAACTACA
Product: Crp family regulatory proteins
Products: NA
Alternate protein names: CAMP Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Regulatory Protein; Crp Family Regulatory Proteins; Bacterial Regulatory Protein Crp Family
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNFHSYGEPPSKLVRIITGQSVLIDPSSRPKGTCLEVESGIARVYCPCEETEGMTLAFLQSGDQLRTDLLCSEGVCVEAL TDLSFHSNVNIDQNIGFDAVNEWTLQLLRIRHLGNAEQRLQALFSILVNRLGRRCGQWCELPFRLTHERIGELIGSTRVT STRLISKLRSSELLIAPIGTQTISVAPSFIETSPL
Sequences:
>Translated_195_residues MNFHSYGEPPSKLVRIITGQSVLIDPSSRPKGTCLEVESGIARVYCPCEETEGMTLAFLQSGDQLRTDLLCSEGVCVEAL TDLSFHSNVNIDQNIGFDAVNEWTLQLLRIRHLGNAEQRLQALFSILVNRLGRRCGQWCELPFRLTHERIGELIGSTRVT STRLISKLRSSELLIAPIGTQTISVAPSFIETSPL >Mature_195_residues MNFHSYGEPPSKLVRIITGQSVLIDPSSRPKGTCLEVESGIARVYCPCEETEGMTLAFLQSGDQLRTDLLCSEGVCVEAL TDLSFHSNVNIDQNIGFDAVNEWTLQLLRIRHLGNAEQRLQALFSILVNRLGRRCGQWCELPFRLTHERIGELIGSTRVT STRLISKLRSSELLIAPIGTQTISVAPSFIETSPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21628; Mature: 21628
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFHSYGEPPSKLVRIITGQSVLIDPSSRPKGTCLEVESGIARVYCPCEETEGMTLAFLQ CCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEC SGDQLRTDLLCSEGVCVEALTDLSFHSNVNIDQNIGFDAVNEWTLQLLRIRHLGNAEQRL CCCHHHHHHHHCCCCHHHHHHHCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH QALFSILVNRLGRRCGQWCELPFRLTHERIGELIGSTRVTSTRLISKLRSSELLIAPIGT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCC QTISVAPSFIETSPL CEEECCCHHHCCCCC >Mature Secondary Structure MNFHSYGEPPSKLVRIITGQSVLIDPSSRPKGTCLEVESGIARVYCPCEETEGMTLAFLQ CCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEC SGDQLRTDLLCSEGVCVEALTDLSFHSNVNIDQNIGFDAVNEWTLQLLRIRHLGNAEQRL CCCHHHHHHHHCCCCHHHHHHHCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH QALFSILVNRLGRRCGQWCELPFRLTHERIGELIGSTRVTSTRLISKLRSSELLIAPIGT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCC QTISVAPSFIETSPL CEEECCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA