Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968398

Identifier: 123968398

GI number: 123968398

Start: 748994

End: 749653

Strand: Reverse

Name: 123968398

Synonym: A9601_08651

Alternate gene names: NA

Gene position: 749653-748994 (Counterclockwise)

Preceding gene: 123968399

Following gene: 123968397

Centisome position: 44.89

GC content: 30.61

Gene sequence:

>660_bases
ATGAAATTAGCAATTACTGGTGCATCGGGGAAAACAGGTTATAGAATTTGCGAAGAAGCAGTTAAGAAAGGATATAAGGT
AAGGCAAATCATCAGAAAGAATTCAAAAGTTTCAGCAGGACTAGAGCGTTTAGAAACAATTAGGATTTCATTAGACAAAA
AAGGAGAACTTGATGAAGCTTTAAAAGATATGGATGTTTTGATAATTGCGACTGGGGCGAGAGCATCATTAGATTTAACT
GGTCCTGCGAAGGTTGATGCATTAGGTGTATACAGGCAATTAGAGAGTTGCAAAAGAGTTGGTATTAAAAGAGTTATTTT
AGTTAGTTCCCTTTGTACTGGTAAATTATTTCACCCATTAAACTTATTTGGTTTAATTCTTATTTGGAAGAAATTAGGTG
AAAACTTTCTACGCAATTCAAATTTTGAATGGACTATTATTAGACCTGGAGGATTAAAGGAAAATGAAGATATCAAATCA
GAAAATATAAATTATTCTAAAGAGGATACTCAAATTAATGGATCAATCCCAAGAAGATTAGTTGCGCAATGTTGTATAGA
TTCTTTAAAAAACAAAGAATCCATAAATAAATTAATAGAAGTTACAAGTTCGAACGATAATAAAAAAATATCTTTTAAAA
AAGCTATGCAAATGATTTAA

Upstream 100 bases:

>100_bases
AATGTTATTTATGTCGTACTCTTTATCCAAAAAGAAAAAAGAAATTTATATGTAAAAAGCCTTAAGAAATTTATATAATA
TTTAAATTAGTTTTTTAATC

Downstream 100 bases:

>100_bases
AAGATGTAAATATATAAATTAAAACTATGAAAATAAATCCCAAAATTGACGCATTACAATTAATGCTTACTGATTTAAGA
ACTAGAAATGAGCCAATAAG

Product: putative NADH-flavin reductase

Products: NA

Alternate protein names: NADH-Flavin Reductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerase-Like; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKLAITGASGKTGYRICEEAVKKGYKVRQIIRKNSKVSAGLERLETIRISLDKKGELDEALKDMDVLIIATGARASLDLT
GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKLGENFLRNSNFEWTIIRPGGLKENEDIKS
ENINYSKEDTQINGSIPRRLVAQCCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI

Sequences:

>Translated_219_residues
MKLAITGASGKTGYRICEEAVKKGYKVRQIIRKNSKVSAGLERLETIRISLDKKGELDEALKDMDVLIIATGARASLDLT
GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKLGENFLRNSNFEWTIIRPGGLKENEDIKS
ENINYSKEDTQINGSIPRRLVAQCCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI
>Mature_219_residues
MKLAITGASGKTGYRICEEAVKKGYKVRQIIRKNSKVSAGLERLETIRISLDKKGELDEALKDMDVLIIATGARASLDLT
GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKLGENFLRNSNFEWTIIRPGGLKENEDIKS
ENINYSKEDTQINGSIPRRLVAQCCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6323737, Length=221, Percent_Identity=27.1493212669683, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24485; Mature: 24485

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAITGASGKTGYRICEEAVKKGYKVRQIIRKNSKVSAGLERLETIRISLDKKGELDEA
CEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCHHHH
LKDMDVLIIATGARASLDLTGPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPL
HHCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH
NLFGLILIWKKLGENFLRNSNFEWTIIRPGGLKENEDIKSENINYSKEDTQINGSIPRRL
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH
VAQCCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI
HHHHHHHHHCCHHHHHHHHHHCCCCCCCEEHHHHHHHCC
>Mature Secondary Structure
MKLAITGASGKTGYRICEEAVKKGYKVRQIIRKNSKVSAGLERLETIRISLDKKGELDEA
CEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCHHHH
LKDMDVLIIATGARASLDLTGPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPL
HHCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH
NLFGLILIWKKLGENFLRNSNFEWTIIRPGGLKENEDIKSENINYSKEDTQINGSIPRRL
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH
VAQCCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI
HHHHHHHHHCCHHHHHHHHHHCCCCCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA