| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is hemA [H]
Identifier: 123968363
GI number: 123968363
Start: 719020
End: 720330
Strand: Direct
Name: hemA [H]
Synonym: A9601_08301
Alternate gene names: 123968363
Gene position: 719020-720330 (Clockwise)
Preceding gene: 123968362
Following gene: 123968364
Centisome position: 43.06
GC content: 33.49
Gene sequence:
>1311_bases ATGCATATTGTTGTCGTCGGACTGAGTCATCGCACGGCACCTGTTGAAGTGCGTGAGAAATTAAGTATTCCTGACCAATC CATAACAGAATCATTGAAAGCATTAAAAGCTTTCTCTGATGTATTAGAGGTGTCAATCTTAAGTACTTGTAATAGGATGG AAATATATGCACTAGTAAAGGATAAAAATACTGGAATTTCATCTATAAAGGAATTTATATCAGAATATTCTGGAATTATT TTTGAAGATTTAAATCCACATCTTTTTTGCTTTAGACAGGAAGAAGCAGTTTTGCATTTGATGAAAGTCTCGGCAGGACT CGATAGCCTCGTTTTAGGTGAAGGACAAATCCTTTCGCAGGTAAAAAAAATGATGAGGTTAGGTCAAGAAAATCAATCTA CTGGCCCAATTCTTAATAGATTATTAACACAATCAGTTAGTACAGGTAAAAAAGTAAGATCTGAAACAAATTTAGGAACT GGAGCCGTATCAATTAGTTCAGCAGCTGTAGAACTTGCCCAATTAAAAATTGGACAAGAAAAGGGTTTTGATACTCTCGT AAGTTTGGAATCAGAGAACGTTCTTGTTGTTGGCGCTGGACGAATGAGTAGGCTATTAATAACTCATTTAAAATCAAAAG GATGTCATAAACTTATCCTTTTAAATAGAAATATTGATAGAGCATTAAATCTTGCTCAAGACTTTCCTGATTTAGAGATT GTTTGTAGAGGGTTAAATGAATTAGAAGAAAACATATCACTATCTTCCATTGTTTTCACCAGTACTGCTTCTGAAGAGCC AATTATTGATCTCGCAAAAATTGAAAAATTAAATTTGAGTAATAGACTTAAATTTATTGATATTGGTGTACCGAGAAATA TATCTAATGATGTCAAACAACATCAATTTGTAAAATCATTTGATGTTGATGACTTACAAGAGGTAGTTTCAAGAAATCAA GAATTTAGACAGAAAATAGCAAAGGAAGCGGAATCTTTAGTAGAAGAAGAAAGGATCATTTTTCTAGAATGGTGGGCAAG TTTAGAGGCCGTTCCAGTAATTAATAAACTTAGATCAGATTTGGAGTTGATTAGAAAAGAGGAATTGCAAAAAGCACTTA GCAGAATGGGACCAGATTTTTCGGCTCGAGAAAGAAAAGTTGTGGAAGCTCTGACTAAAGGAATAATTAATAAAATACTT CATACGCCGGTCACCAAGTTGAGAAGTCCTCAATCAAGAGAAGAAAGACAAGTTTCTTTGAAAATCGTTGAAAAATTGTT TTCTTTGGTAGAAGAGGAACAAAATAACTAA
Upstream 100 bases:
>100_bases GGTTATTAGTACATTAGATAGTACTGCAAGGTTCACAAATACTGTCCATATAAAAGATGGTGCTAAGAGTATCAGCCTTT AAAAATTCATTGTTGATATT
Downstream 100 bases:
>100_bases CTTTTTTCGATTTATATTAAGTTTTTCCAGTGATTTATCGAAATACCTTTGTAAACTGACCATTTGTATTTCTAAATATG CACATAATCAGTTACTTTAA
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MHIVVVGLSHRTAPVEVREKLSIPDQSITESLKALKAFSDVLEVSILSTCNRMEIYALVKDKNTGISSIKEFISEYSGII FEDLNPHLFCFRQEEAVLHLMKVSAGLDSLVLGEGQILSQVKKMMRLGQENQSTGPILNRLLTQSVSTGKKVRSETNLGT GAVSISSAAVELAQLKIGQEKGFDTLVSLESENVLVVGAGRMSRLLITHLKSKGCHKLILLNRNIDRALNLAQDFPDLEI VCRGLNELEENISLSSIVFTSTASEEPIIDLAKIEKLNLSNRLKFIDIGVPRNISNDVKQHQFVKSFDVDDLQEVVSRNQ EFRQKIAKEAESLVEEERIIFLEWWASLEAVPVINKLRSDLELIRKEELQKALSRMGPDFSARERKVVEALTKGIINKIL HTPVTKLRSPQSREERQVSLKIVEKLFSLVEEEQNN
Sequences:
>Translated_436_residues MHIVVVGLSHRTAPVEVREKLSIPDQSITESLKALKAFSDVLEVSILSTCNRMEIYALVKDKNTGISSIKEFISEYSGII FEDLNPHLFCFRQEEAVLHLMKVSAGLDSLVLGEGQILSQVKKMMRLGQENQSTGPILNRLLTQSVSTGKKVRSETNLGT GAVSISSAAVELAQLKIGQEKGFDTLVSLESENVLVVGAGRMSRLLITHLKSKGCHKLILLNRNIDRALNLAQDFPDLEI VCRGLNELEENISLSSIVFTSTASEEPIIDLAKIEKLNLSNRLKFIDIGVPRNISNDVKQHQFVKSFDVDDLQEVVSRNQ EFRQKIAKEAESLVEEERIIFLEWWASLEAVPVINKLRSDLELIRKEELQKALSRMGPDFSARERKVVEALTKGIINKIL HTPVTKLRSPQSREERQVSLKIVEKLFSLVEEEQNN >Mature_436_residues MHIVVVGLSHRTAPVEVREKLSIPDQSITESLKALKAFSDVLEVSILSTCNRMEIYALVKDKNTGISSIKEFISEYSGII FEDLNPHLFCFRQEEAVLHLMKVSAGLDSLVLGEGQILSQVKKMMRLGQENQSTGPILNRLLTQSVSTGKKVRSETNLGT GAVSISSAAVELAQLKIGQEKGFDTLVSLESENVLVVGAGRMSRLLITHLKSKGCHKLILLNRNIDRALNLAQDFPDLEI VCRGLNELEENISLSSIVFTSTASEEPIIDLAKIEKLNLSNRLKFIDIGVPRNISNDVKQHQFVKSFDVDDLQEVVSRNQ EFRQKIAKEAESLVEEERIIFLEWWASLEAVPVINKLRSDLELIRKEELQKALSRMGPDFSARERKVVEALTKGIINKIL HTPVTKLRSPQSREERQVSLKIVEKLFSLVEEEQNN
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=413, Percent_Identity=34.3825665859564, Blast_Score=208, Evalue=5e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 48928; Mature: 48928
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIVVVGLSHRTAPVEVREKLSIPDQSITESLKALKAFSDVLEVSILSTCNRMEIYALVK CEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE DKNTGISSIKEFISEYSGIIFEDLNPHLFCFRQEEAVLHLMKVSAGLDSLVLGEGQILSQ CCCCCHHHHHHHHHHHCCEEEECCCCCEEEEEHHHHHHHHHHHHCCCCHHEECCCHHHHH VKKMMRLGQENQSTGPILNRLLTQSVSTGKKVRSETNLGTGAVSISSAAVELAQLKIGQE HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCC KGFDTLVSLESENVLVVGAGRMSRLLITHLKSKGCHKLILLNRNIDRALNLAQDFPDLEI CCCHHHEEECCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCHHH VCRGLNELEENISLSSIVFTSTASEEPIIDLAKIEKLNLSNRLKFIDIGVPRNISNDVKQ HHHHHHHHHHCCCHHHEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH HQFVKSFDVDDLQEVVSRNQEFRQKIAKEAESLVEEERIIFLEWWASLEAVPVINKLRSD HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEHHCCCHHHHHHHHHHH LELIRKEELQKALSRMGPDFSARERKVVEALTKGIINKILHTPVTKLRSPQSREERQVSL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH KIVEKLFSLVEEEQNN HHHHHHHHHHHHHCCC >Mature Secondary Structure MHIVVVGLSHRTAPVEVREKLSIPDQSITESLKALKAFSDVLEVSILSTCNRMEIYALVK CEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE DKNTGISSIKEFISEYSGIIFEDLNPHLFCFRQEEAVLHLMKVSAGLDSLVLGEGQILSQ CCCCCHHHHHHHHHHHCCEEEECCCCCEEEEEHHHHHHHHHHHHCCCCHHEECCCHHHHH VKKMMRLGQENQSTGPILNRLLTQSVSTGKKVRSETNLGTGAVSISSAAVELAQLKIGQE HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCC KGFDTLVSLESENVLVVGAGRMSRLLITHLKSKGCHKLILLNRNIDRALNLAQDFPDLEI CCCHHHEEECCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCHHH VCRGLNELEENISLSSIVFTSTASEEPIIDLAKIEKLNLSNRLKFIDIGVPRNISNDVKQ HHHHHHHHHHCCCHHHEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH HQFVKSFDVDDLQEVVSRNQEFRQKIAKEAESLVEEERIIFLEWWASLEAVPVINKLRSD HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEHHCCCHHHHHHHHHHH LELIRKEELQKALSRMGPDFSARERKVVEALTKGIINKILHTPVTKLRSPQSREERQVSL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH KIVEKLFSLVEEEQNN HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA