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The map label for this gene is vanY [H]

Identifier: 123968356

GI number: 123968356

Start: 712139

End: 712852

Strand: Direct

Name: vanY [H]

Synonym: A9601_08231

Alternate gene names: 123968356

Gene position: 712139-712852 (Clockwise)

Preceding gene: 123968354

Following gene: 123968357

Centisome position: 42.65

GC content: 32.35

Gene sequence:

>714_bases
TTGGAACTAAACAAAGATATCGATCAAATTGATATACCACTTGCCAAAAGAACTTACTTAAACAACCCAAATTCAACATT
ATTAAAAAAATTATTAATATTTTCTCCATTTCTTTTCCTTATATTTTCTATCGCTGCATTGCGATTTATTAGAAATGTAG
AATTAATACCTCTCAGTAATCTCAAATTTGAGGTTAAAAGAAATCATAATGCCAGAATACTGGGCCATCTTCCCTATGAG
GAAACTCCTAAAGAGAAACTAGTTTTAATTGAGCCTAATATTGAAGTCCATATGGATATGCGCGATTCTCTACTAAAAAT
GAGAGAAGAAGCCAAAAAGGATGGGATATATTTGGTCTTCTTAAGTGGTTATAGATCAATAAATTTGCAAAACGATATTT
TTTATTCTTTAAAATCTATTAGAAATCAAGAAGCGGCAGAAAGAGCTAGAGTTTCAGCCCCTCCTGGATATTCTGAACAT
AGTACAGGTTTCGCAATCGATATTGGTGATGCTACTCAAAGAGAGACAGACTTTGAAACCGACTTCGAAAATACTGACGC
CTTTAGATGGCTCAAAAAAAATGCAGCTAAGTTTCACTTTAAGTTATCGTTCAACAAAGATAATAAATATATAGATTACG
AACCCTGGCATTGGAGATATGAGGGGTCAATTGAAGCATTAAAAGTTTTTGAAAGCGCTAATAGAAAATTATAA

Upstream 100 bases:

>100_bases
AATACTGTATATAAAAACTACATCTTTTTTGCTTATAAAAGTGCATTTCTTAAAATAATAGTTAATATCGAAATATCTTT
TCCAAATTCACTTCTAAATA

Downstream 100 bases:

>100_bases
ACCTAATTGATTGATTTAATTATTCAATTAGATTATATTTTTCAAAGTCTTAAAGAGAAAATTCTCATAATAAGCATACT
TTGAGTTAGCCTTAATAAAG

Product: putative carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MELNKDIDQIDIPLAKRTYLNNPNSTLLKKLLIFSPFLFLIFSIAALRFIRNVELIPLSNLKFEVKRNHNARILGHLPYE
ETPKEKLVLIEPNIEVHMDMRDSLLKMREEAKKDGIYLVFLSGYRSINLQNDIFYSLKSIRNQEAAERARVSAPPGYSEH
STGFAIDIGDATQRETDFETDFENTDAFRWLKKNAAKFHFKLSFNKDNKYIDYEPWHWRYEGSIEALKVFESANRKL

Sequences:

>Translated_237_residues
MELNKDIDQIDIPLAKRTYLNNPNSTLLKKLLIFSPFLFLIFSIAALRFIRNVELIPLSNLKFEVKRNHNARILGHLPYE
ETPKEKLVLIEPNIEVHMDMRDSLLKMREEAKKDGIYLVFLSGYRSINLQNDIFYSLKSIRNQEAAERARVSAPPGYSEH
STGFAIDIGDATQRETDFETDFENTDAFRWLKKNAAKFHFKLSFNKDNKYIDYEPWHWRYEGSIEALKVFESANRKL
>Mature_237_residues
MELNKDIDQIDIPLAKRTYLNNPNSTLLKKLLIFSPFLFLIFSIAALRFIRNVELIPLSNLKFEVKRNHNARILGHLPYE
ETPKEKLVLIEPNIEVHMDMRDSLLKMREEAKKDGIYLVFLSGYRSINLQNDIFYSLKSIRNQEAAERARVSAPPGYSEH
STGFAIDIGDATQRETDFETDFENTDAFRWLKKNAAKFHFKLSFNKDNKYIDYEPWHWRYEGSIEALKVFESANRKL

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR003709 [H]

Pfam domain/function: PF02557 VanY [H]

EC number: NA

Molecular weight: Translated: 27822; Mature: 27822

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNKDIDQIDIPLAKRTYLNNPNSTLLKKLLIFSPFLFLIFSIAALRFIRNVELIPLSN
CCCCCCCCHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
LKFEVKRNHNARILGHLPYEETPKEKLVLIEPNIEVHMDMRDSLLKMREEAKKDGIYLVF
CEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHCCEEEEE
LSGYRSINLQNDIFYSLKSIRNQEAAERARVSAPPGYSEHSTGFAIDIGDATQRETDFET
ECCCCEECCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
DFENTDAFRWLKKNAAKFHFKLSFNKDNKYIDYEPWHWRYEGSIEALKVFESANRKL
CCCCCHHHHHHHHCCEEEEEEEEECCCCCEECCCCCEEEECCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MELNKDIDQIDIPLAKRTYLNNPNSTLLKKLLIFSPFLFLIFSIAALRFIRNVELIPLSN
CCCCCCCCHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
LKFEVKRNHNARILGHLPYEETPKEKLVLIEPNIEVHMDMRDSLLKMREEAKKDGIYLVF
CEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHCCEEEEE
LSGYRSINLQNDIFYSLKSIRNQEAAERARVSAPPGYSEHSTGFAIDIGDATQRETDFET
ECCCCEECCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
DFENTDAFRWLKKNAAKFHFKLSFNKDNKYIDYEPWHWRYEGSIEALKVFESANRKL
CCCCCHHHHHHHHCCEEEEEEEEECCCCCEECCCCCEEEECCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]