| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968320
Identifier: 123968320
GI number: 123968320
Start: 683203
End: 683616
Strand: Reverse
Name: 123968320
Synonym: A9601_07851
Alternate gene names: NA
Gene position: 683616-683203 (Counterclockwise)
Preceding gene: 123968321
Following gene: 123968319
Centisome position: 40.94
GC content: 25.36
Gene sequence:
>414_bases ATGAGCATAAGCAAAATTTTAAATTCACTAGAAAAATCCTGGGAAAGAGATGATATTCTCTTAAATATAAAGAAAGGGTT AGGGACAGATGAGATAGTTAATGAATTTCTTATGAAAAACGAAAACCAAATTAAAGAATTAAATTCTTTATTAAGAGCGG AAGATATTGAATTATTAAATCAAGTAGAAAAACTCTCAACTTGCGAAACTAAATTAATAAATGAGATTAAAAATTTAAAT TACTTAGAAAATAATGAAAATCATCATATTATGAATAAAAAAAAGATTGAGCCATCTAATAGAGTTTCTTTCAACAAGAT TAGTTCGTTCATGATTAGTTGGAGTAATAAATTTGTAGTTATTGCTTTACTAACAATTTCAGCCATAGCTTTATCAAAAC AAGCATGGTCATAA
Upstream 100 bases:
>100_bases TATTCGTAAATCTTAAATAAAAATAATTTTTTTTAATTACTTAAAGGAATAAGCCACAGAAGAAAAAAATAATAAATTAT CATAAGTAAAAATACTTAAA
Downstream 100 bases:
>100_bases TTAGCTAAATTAACTTCATTGTAAGAGATGTAGTTTTGAGAACTAAACAAGAATATTTAATTAGATATAAAGATGGAAAT CTTTATTGTGAACTTGCTGA
Product: COMC family protein
Products: NA
Alternate protein names: Comc Family Protein; ComC Family Protein-Like
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSISKILNSLEKSWERDDILLNIKKGLGTDEIVNEFLMKNENQIKELNSLLRAEDIELLNQVEKLSTCETKLINEIKNLN YLENNENHHIMNKKKIEPSNRVSFNKISSFMISWSNKFVVIALLTISAIALSKQAWS
Sequences:
>Translated_137_residues MSISKILNSLEKSWERDDILLNIKKGLGTDEIVNEFLMKNENQIKELNSLLRAEDIELLNQVEKLSTCETKLINEIKNLN YLENNENHHIMNKKKIEPSNRVSFNKISSFMISWSNKFVVIALLTISAIALSKQAWS >Mature_136_residues SISKILNSLEKSWERDDILLNIKKGLGTDEIVNEFLMKNENQIKELNSLLRAEDIELLNQVEKLSTCETKLINEIKNLNY LENNENHHIMNKKKIEPSNRVSFNKISSFMISWSNKFVVIALLTISAIALSKQAWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15835; Mature: 15703
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISKILNSLEKSWERDDILLNIKKGLGTDEIVNEFLMKNENQIKELNSLLRAEDIELLN CCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QVEKLSTCETKLINEIKNLNYLENNENHHIMNKKKIEPSNRVSFNKISSFMISWSNKFVV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH IALLTISAIALSKQAWS HHHHHHHHHHHHHHCCC >Mature Secondary Structure SISKILNSLEKSWERDDILLNIKKGLGTDEIVNEFLMKNENQIKELNSLLRAEDIELLN CHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QVEKLSTCETKLINEIKNLNYLENNENHHIMNKKKIEPSNRVSFNKISSFMISWSNKFVV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH IALLTISAIALSKQAWS HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA