Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968320

Identifier: 123968320

GI number: 123968320

Start: 683203

End: 683616

Strand: Reverse

Name: 123968320

Synonym: A9601_07851

Alternate gene names: NA

Gene position: 683616-683203 (Counterclockwise)

Preceding gene: 123968321

Following gene: 123968319

Centisome position: 40.94

GC content: 25.36

Gene sequence:

>414_bases
ATGAGCATAAGCAAAATTTTAAATTCACTAGAAAAATCCTGGGAAAGAGATGATATTCTCTTAAATATAAAGAAAGGGTT
AGGGACAGATGAGATAGTTAATGAATTTCTTATGAAAAACGAAAACCAAATTAAAGAATTAAATTCTTTATTAAGAGCGG
AAGATATTGAATTATTAAATCAAGTAGAAAAACTCTCAACTTGCGAAACTAAATTAATAAATGAGATTAAAAATTTAAAT
TACTTAGAAAATAATGAAAATCATCATATTATGAATAAAAAAAAGATTGAGCCATCTAATAGAGTTTCTTTCAACAAGAT
TAGTTCGTTCATGATTAGTTGGAGTAATAAATTTGTAGTTATTGCTTTACTAACAATTTCAGCCATAGCTTTATCAAAAC
AAGCATGGTCATAA

Upstream 100 bases:

>100_bases
TATTCGTAAATCTTAAATAAAAATAATTTTTTTTAATTACTTAAAGGAATAAGCCACAGAAGAAAAAAATAATAAATTAT
CATAAGTAAAAATACTTAAA

Downstream 100 bases:

>100_bases
TTAGCTAAATTAACTTCATTGTAAGAGATGTAGTTTTGAGAACTAAACAAGAATATTTAATTAGATATAAAGATGGAAAT
CTTTATTGTGAACTTGCTGA

Product: COMC family protein

Products: NA

Alternate protein names: Comc Family Protein; ComC Family Protein-Like

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSISKILNSLEKSWERDDILLNIKKGLGTDEIVNEFLMKNENQIKELNSLLRAEDIELLNQVEKLSTCETKLINEIKNLN
YLENNENHHIMNKKKIEPSNRVSFNKISSFMISWSNKFVVIALLTISAIALSKQAWS

Sequences:

>Translated_137_residues
MSISKILNSLEKSWERDDILLNIKKGLGTDEIVNEFLMKNENQIKELNSLLRAEDIELLNQVEKLSTCETKLINEIKNLN
YLENNENHHIMNKKKIEPSNRVSFNKISSFMISWSNKFVVIALLTISAIALSKQAWS
>Mature_136_residues
SISKILNSLEKSWERDDILLNIKKGLGTDEIVNEFLMKNENQIKELNSLLRAEDIELLNQVEKLSTCETKLINEIKNLNY
LENNENHHIMNKKKIEPSNRVSFNKISSFMISWSNKFVVIALLTISAIALSKQAWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15835; Mature: 15703

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISKILNSLEKSWERDDILLNIKKGLGTDEIVNEFLMKNENQIKELNSLLRAEDIELLN
CCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QVEKLSTCETKLINEIKNLNYLENNENHHIMNKKKIEPSNRVSFNKISSFMISWSNKFVV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
IALLTISAIALSKQAWS
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SISKILNSLEKSWERDDILLNIKKGLGTDEIVNEFLMKNENQIKELNSLLRAEDIELLN
CHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QVEKLSTCETKLINEIKNLNYLENNENHHIMNKKKIEPSNRVSFNKISSFMISWSNKFVV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
IALLTISAIALSKQAWS
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA