Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968289

Identifier: 123968289

GI number: 123968289

Start: 664413

End: 664649

Strand: Reverse

Name: 123968289

Synonym: A9601_07541

Alternate gene names: NA

Gene position: 664649-664413 (Counterclockwise)

Preceding gene: 123968290

Following gene: 123968288

Centisome position: 39.8

GC content: 28.27

Gene sequence:

>237_bases
TTGTGGAAAATAATTGAAAAAATATTAATGGAGAATAAAAAATGGGCTCCCTCCAAAGAAGAAAATTTAGGGGTAATAAC
GAGTGTATATGAATTCATTAAAGAAAAACTTTCAGAACTTCAAAATAAAACTGGATGTCCAGATTCATTTATTTATGATT
TTATTGGCAATATTCAGAATGAATGGCATCCTGAATCTTGCCACTCCATAGTTAGAAATAAAAAAAGGAAAAATTAG

Upstream 100 bases:

>100_bases
AGTTTTGATAAGTATTCAGATGCGTACGATTTGTTAGAGGAACTATATGGAGATTTATGTTGTTCAGATGCTGATTATGG
AGACATAACCTATTACGATA

Downstream 100 bases:

>100_bases
AAAATATTAAATCTTCAACGCAAATTTATAAAATTTCTCTAATATAATTTGAATTTAAAAATACCAATTCATGATTATTA
GAATACTAGGAATCGTACTT

Product: DDT domain-containing protein

Products: NA

Alternate protein names: DDT Domain-Containing Protein-Like

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MWKIIEKILMENKKWAPSKEENLGVITSVYEFIKEKLSELQNKTGCPDSFIYDFIGNIQNEWHPESCHSIVRNKKRKN

Sequences:

>Translated_78_residues
MWKIIEKILMENKKWAPSKEENLGVITSVYEFIKEKLSELQNKTGCPDSFIYDFIGNIQNEWHPESCHSIVRNKKRKN
>Mature_78_residues
MWKIIEKILMENKKWAPSKEENLGVITSVYEFIKEKLSELQNKTGCPDSFIYDFIGNIQNEWHPESCHSIVRNKKRKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9284; Mature: 9284

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKIIEKILMENKKWAPSKEENLGVITSVYEFIKEKLSELQNKTGCPDSFIYDFIGNIQN
CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
EWHPESCHSIVRNKKRKN
CCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MWKIIEKILMENKKWAPSKEENLGVITSVYEFIKEKLSELQNKTGCPDSFIYDFIGNIQN
CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
EWHPESCHSIVRNKKRKN
CCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA