Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968288

Identifier: 123968288

GI number: 123968288

Start: 664019

End: 664231

Strand: Reverse

Name: 123968288

Synonym: A9601_07531

Alternate gene names: NA

Gene position: 664231-664019 (Counterclockwise)

Preceding gene: 123968289

Following gene: 123968287

Centisome position: 39.78

GC content: 33.8

Gene sequence:

>213_bases
ATGAAATGGCCTCCTACTTTGTGTTGGACAGCACCAAAAACAATTAATGGTAATAGGCATTTTCAAGTGAAAGCTTATGG
TGGGAAAAATGAAGATAGATGGGTTGATATTTTTCCTACCAAAAATAAAAAAGATATTAAAAGAATCTCGTGGGCAAAAC
TAAAAACAGAATGGACTACTGGATGGATAAGGCTCCCAAAAGATAAAGATTAA

Upstream 100 bases:

>100_bases
AATACTAGGAATCGTACTTATCGTAGGTACGATTGCATATTATGGTTTAGTGTTAACTGGGCAAAGCAACCTTTAGTTTT
TTATCTTTTAAAAATTTCTC

Downstream 100 bases:

>100_bases
TTTGTATATGTAAACAAATATTATTAACCAGAAAAATGTAAAAAATAATACCTAACTCAAAAAAAATAACTTCTAAAATT
TTTTAAATTGCTGTTTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MKWPPTLCWTAPKTINGNRHFQVKAYGGKNEDRWVDIFPTKNKKDIKRISWAKLKTEWTTGWIRLPKDKD

Sequences:

>Translated_70_residues
MKWPPTLCWTAPKTINGNRHFQVKAYGGKNEDRWVDIFPTKNKKDIKRISWAKLKTEWTTGWIRLPKDKD
>Mature_70_residues
MKWPPTLCWTAPKTINGNRHFQVKAYGGKNEDRWVDIFPTKNKKDIKRISWAKLKTEWTTGWIRLPKDKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8371; Mature: 8371

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWPPTLCWTAPKTINGNRHFQVKAYGGKNEDRWVDIFPTKNKKDIKRISWAKLKTEWTT
CCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCC
GWIRLPKDKD
CEEECCCCCC
>Mature Secondary Structure
MKWPPTLCWTAPKTINGNRHFQVKAYGGKNEDRWVDIFPTKNKKDIKRISWAKLKTEWTT
CCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCC
GWIRLPKDKD
CEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA