| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968132
Identifier: 123968132
GI number: 123968132
Start: 521158
End: 521505
Strand: Direct
Name: 123968132
Synonym: A9601_05971
Alternate gene names: NA
Gene position: 521158-521505 (Clockwise)
Preceding gene: 123968131
Following gene: 123968133
Centisome position: 31.21
GC content: 25.29
Gene sequence:
>348_bases TTGACAAAATCTTTTTATAAAAATAGTAATTTTTACAAAAAATATCTAGGGCCTGTATTTATAAAAAGACAACATAAACA GGACAATTTTGTATCTTTAATTTTTTTAATTATAAAAATATGCTTTTCCCTTTTAGCTATAATAAGCTTGATTAAACTTG GTTATAGCTCCAAAGTAAGGTTGACAAGATTAAGGGAAATTCAAGACTCATTTTCATACGAAAAATATAGATTTAATTTT TTAACAAATAAGTTTGACGATTTATTTTCTTCAGAAGGTGAGCAAAGATTTATGAAGGATCAGGATCAAATAATTTCTAG AGACATTATCAGAGTAATATGGCGTTGA
Upstream 100 bases:
>100_bases AGTTTGGGTAGGAACTGAAATTTTATAGAAAAATTAAATTTATAAGGTAATAATATAATAAAACTGAATTGATTTTCAGT AAAAATATCAAATACTAAAT
Downstream 100 bases:
>100_bases TAAGGCTGATTTAGAGTCAATTTTCTTATCATTTTTCTATTAACTTTTTTATAGTGAGCCAGAACAACAAAGGTCTAGTC CTAATAACAGGCACAACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTKSFYKNSNFYKKYLGPVFIKRQHKQDNFVSLIFLIIKICFSLLAIISLIKLGYSSKVRLTRLREIQDSFSYEKYRFNF LTNKFDDLFSSEGEQRFMKDQDQIISRDIIRVIWR
Sequences:
>Translated_115_residues MTKSFYKNSNFYKKYLGPVFIKRQHKQDNFVSLIFLIIKICFSLLAIISLIKLGYSSKVRLTRLREIQDSFSYEKYRFNF LTNKFDDLFSSEGEQRFMKDQDQIISRDIIRVIWR >Mature_114_residues TKSFYKNSNFYKKYLGPVFIKRQHKQDNFVSLIFLIIKICFSLLAIISLIKLGYSSKVRLTRLREIQDSFSYEKYRFNFL TNKFDDLFSSEGEQRFMKDQDQIISRDIIRVIWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13971; Mature: 13839
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSFYKNSNFYKKYLGPVFIKRQHKQDNFVSLIFLIIKICFSLLAIISLIKLGYSSKVR CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LTRLREIQDSFSYEKYRFNFLTNKFDDLFSSEGEQRFMKDQDQIISRDIIRVIWR HHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKSFYKNSNFYKKYLGPVFIKRQHKQDNFVSLIFLIIKICFSLLAIISLIKLGYSSKVR CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LTRLREIQDSFSYEKYRFNFLTNKFDDLFSSEGEQRFMKDQDQIISRDIIRVIWR HHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA