| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is psaM [H]
Identifier: 123968131
GI number: 123968131
Start: 520941
End: 521075
Strand: Direct
Name: psaM [H]
Synonym: A9601_05961
Alternate gene names: 123968131
Gene position: 520941-521075 (Clockwise)
Preceding gene: 123968129
Following gene: 123968132
Centisome position: 31.2
GC content: 33.33
Gene sequence:
>135_bases GTGGAGAATATAAGAAATAATTTTTTTACCATGGAGCCAACTCAAACAATAAATCTAATTGCATTAAGCCTCATAGTAGT TATTCATGCAGGAGTTTTAGCACTAAGACTAGGAATTAGTTTGGGTAGGAACTGA
Upstream 100 bases:
>100_bases CTATGTAGATTTATTAATGATAATTTTCAATAATGTTTTCTTTCAATTTGTTAATTACGTTACATCATTTTGTAATAGTG TTTCAAATTCCCTCTTTTCG
Downstream 100 bases:
>100_bases AATTTTATAGAAAAATTAAATTTATAAGGTAATAATATAATAAAACTGAATTGATTTTCAGTAAAAATATCAAATACTAA ATTTGACAAAATCTTTTTAT
Product: photosystem I reaction center subunit XII
Products: NA
Alternate protein names: PSI-M [H]
Number of amino acids: Translated: 44; Mature: 44
Protein sequence:
>44_residues MENIRNNFFTMEPTQTINLIALSLIVVIHAGVLALRLGISLGRN
Sequences:
>Translated_44_residues MENIRNNFFTMEPTQTINLIALSLIVVIHAGVLALRLGISLGRN >Mature_44_residues MENIRNNFFTMEPTQTINLIALSLIVVIHAGVLALRLGISLGRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PsaM family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010010 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4865; Mature: 4865
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENIRNNFFTMEPTQTINLIALSLIVVIHAGVLALRLGISLGRN CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MENIRNNFFTMEPTQTINLIALSLIVVIHAGVLALRLGISLGRN CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA