| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is ilvB [H]
Identifier: 123968117
GI number: 123968117
Start: 507621
End: 509384
Strand: Direct
Name: ilvB [H]
Synonym: A9601_05821
Alternate gene names: 123968117
Gene position: 507621-509384 (Clockwise)
Preceding gene: 123968116
Following gene: 123968118
Centisome position: 30.4
GC content: 36.68
Gene sequence:
>1764_bases GTGACTCTTACTTCGAGATCCTTTTCAAAGGGTAGTTCAAAACATGAAAATCCAGTTTGGATAACTGGTGCAGATGCACT AATGGATTCTTTAAAAATTCATGGGGTAAAAGTTATATTTGGATATCCTGGTGGAGCCATACTACCTATATATGACGCTG TTCATAAGGCGGAACAAGAAGGTTGGTTAAAGCATTACATGGTAAGGCATGAACAAGGTGGTTCCCATGCCGCTGATGGA TATGCAAGATCTACTGGTGAAGTAGGAGTATGTTTTGGTACCTCAGGTCCAGGTGCGACAAATTTGGTAACTGGAATTGC AACTGCTCAAATGGATTCAGTCCCCCTAGTTGTAGTTACAGGCCAAGTCCCAAGACCTGCTATAGGGACAGACGCTTTTC AAGAAACTGATATTTTTGGTATAACTCTTCCAATAGTGAAACATTCATGGGTAATAAGAAATCCTTCAGATATCGCGAAA GTAGTTTCGGAAGCTTTTTTCATAGCCTCCTCTGGTAGACCTGGACCTGTTTTAATTGATATACCCAAAGATGTAGGTCA GGAGTTCTTTAATTACCAAAGAGTTTTGCCTGGTGAGATTATTCCTAAAGGATTTAAAAGGAACGGAGATATTAATGATT TCGATATTAATAAAGCAATTAAACTTATAGAAGATTCTGAAAGACCTCTTTTATATGTGGGAGGTGGGGCAATATCTTCA GGAGCTCATGATGAAATAAGAACTTTGGCAAAGAATTATCAAATACCCGTAACTACAACCTTAATGGGTAAGGGCGCTTT TGATGAAAAAGACAATTTATCAGTAGGGATGTTGGGAATGCACGGAACTGCTTACGCAAATTTTGCTGTTACAGAATGTG ATCTTTTAATTGCTGTTGGAGCTAGATTCGATGATAGGGTTACAGGAAAATTAGATACTTTTGCGCCTAATGCAAAGGTA ATTCATATAGATATTGACCCAGCAGAAGTTAATAAAAATAGACGCGTAGATGTTGCAATTGTTTCTGATGTTTCAAAAGC TATTCTAAAAATTAATGAGCAATCTCTAAAAAATAAATTTACTTGTCGGACGAAAAACTGGTTAGAAAAAATTGATTTTT GGAAAAATAAACACCCTTTATATGACCCGCCTAAAGAAGGAGAAATTTATCCACAGGAAGTTCTTTTAAAAGTGAGGGAA CTTTCACCAGAAGCTTATGTCACTACAGATGTAGGACAACATCAAATGTGGGCTGCTCAATATCTTAGGAATTCTCCAAG AAAATGGATTAGTAGTGCAGGCTTAGGAACTATGGGTTTTGGATTGCCAGCGGCAATTGGAGTAAAAGCAGCCTTACCTA ATTCAGATGTAATTTGTATTGCAGGAGATGCAAGTGTATTAATGAATATTCAAGAATTAGGCACTTTATCTCAATATGGT CTAAAGGTGAAATTGATTATTATCAATAATCGCTGGCAAGGGATGGTAAGACAATGGCAGGAAAGTTTCTACGATGAAAG ATATTCCTCATCTGATATGAGTTGTGGTGAACCTGATTTTGTAAAACTTGCTGAATCTTTTGGAGTTAAAGGATACTTAA TTTCTGATAGAAAACAATTACAGAATGAATTAAAAAGTGCGCTTGATCATGATGGCCCTGCCTTAATTAATATTCTTGTC AGAAGAGGTGAAAATTGTTATCCAATGGTTCCTCCTGGTAAAAGTAATGCTCAAATGGTTGGATATGTTAATTGTGAAGA TTAA
Upstream 100 bases:
>100_bases ATTGAAAGATTTTCTGAATACATTTCTGACATTACATTTCTAAATGAGGCAAAAGTATTTAATTAAGTTTAAAATTTATA GTAAATATTGAATTTCTTTA
Downstream 100 bases:
>100_bases TTTTTTTTGAATTCTTCTTTTACAAAAAATTAACTTTAATATAATTCAAACCTTAGATATTTCTGAATTGAAAAAATTAT CAAAATTTTTACTTATAATC
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MTLTSRSFSKGSSKHENPVWITGADALMDSLKIHGVKVIFGYPGGAILPIYDAVHKAEQEGWLKHYMVRHEQGGSHAADG YARSTGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVTGQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRNPSDIAK VVSEAFFIASSGRPGPVLIDIPKDVGQEFFNYQRVLPGEIIPKGFKRNGDINDFDINKAIKLIEDSERPLLYVGGGAISS GAHDEIRTLAKNYQIPVTTTLMGKGAFDEKDNLSVGMLGMHGTAYANFAVTECDLLIAVGARFDDRVTGKLDTFAPNAKV IHIDIDPAEVNKNRRVDVAIVSDVSKAILKINEQSLKNKFTCRTKNWLEKIDFWKNKHPLYDPPKEGEIYPQEVLLKVRE LSPEAYVTTDVGQHQMWAAQYLRNSPRKWISSAGLGTMGFGLPAAIGVKAALPNSDVICIAGDASVLMNIQELGTLSQYG LKVKLIIINNRWQGMVRQWQESFYDERYSSSDMSCGEPDFVKLAESFGVKGYLISDRKQLQNELKSALDHDGPALINILV RRGENCYPMVPPGKSNAQMVGYVNCED
Sequences:
>Translated_587_residues MTLTSRSFSKGSSKHENPVWITGADALMDSLKIHGVKVIFGYPGGAILPIYDAVHKAEQEGWLKHYMVRHEQGGSHAADG YARSTGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVTGQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRNPSDIAK VVSEAFFIASSGRPGPVLIDIPKDVGQEFFNYQRVLPGEIIPKGFKRNGDINDFDINKAIKLIEDSERPLLYVGGGAISS GAHDEIRTLAKNYQIPVTTTLMGKGAFDEKDNLSVGMLGMHGTAYANFAVTECDLLIAVGARFDDRVTGKLDTFAPNAKV IHIDIDPAEVNKNRRVDVAIVSDVSKAILKINEQSLKNKFTCRTKNWLEKIDFWKNKHPLYDPPKEGEIYPQEVLLKVRE LSPEAYVTTDVGQHQMWAAQYLRNSPRKWISSAGLGTMGFGLPAAIGVKAALPNSDVICIAGDASVLMNIQELGTLSQYG LKVKLIIINNRWQGMVRQWQESFYDERYSSSDMSCGEPDFVKLAESFGVKGYLISDRKQLQNELKSALDHDGPALINILV RRGENCYPMVPPGKSNAQMVGYVNCED >Mature_586_residues TLTSRSFSKGSSKHENPVWITGADALMDSLKIHGVKVIFGYPGGAILPIYDAVHKAEQEGWLKHYMVRHEQGGSHAADGY ARSTGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVTGQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRNPSDIAKV VSEAFFIASSGRPGPVLIDIPKDVGQEFFNYQRVLPGEIIPKGFKRNGDINDFDINKAIKLIEDSERPLLYVGGGAISSG AHDEIRTLAKNYQIPVTTTLMGKGAFDEKDNLSVGMLGMHGTAYANFAVTECDLLIAVGARFDDRVTGKLDTFAPNAKVI HIDIDPAEVNKNRRVDVAIVSDVSKAILKINEQSLKNKFTCRTKNWLEKIDFWKNKHPLYDPPKEGEIYPQEVLLKVREL SPEAYVTTDVGQHQMWAAQYLRNSPRKWISSAGLGTMGFGLPAAIGVKAALPNSDVICIAGDASVLMNIQELGTLSQYGL KVKLIIINNRWQGMVRQWQESFYDERYSSSDMSCGEPDFVKLAESFGVKGYLISDRKQLQNELKSALDHDGPALINILVR RGENCYPMVPPGKSNAQMVGYVNCED
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=568, Percent_Identity=27.112676056338, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI21361361, Length=604, Percent_Identity=25, Blast_Score=155, Evalue=9e-38, Organism=Escherichia coli, GI87081685, Length=558, Percent_Identity=45.6989247311828, Blast_Score=494, Evalue=1e-141, Organism=Escherichia coli, GI1790104, Length=565, Percent_Identity=42.8318584070797, Blast_Score=457, Evalue=1e-130, Organism=Escherichia coli, GI1786717, Length=571, Percent_Identity=31.523642732049, Blast_Score=288, Evalue=5e-79, Organism=Escherichia coli, GI1787096, Length=562, Percent_Identity=27.0462633451957, Blast_Score=189, Evalue=3e-49, Organism=Escherichia coli, GI1788716, Length=549, Percent_Identity=24.7723132969035, Blast_Score=151, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17542570, Length=590, Percent_Identity=26.6101694915254, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17531301, Length=578, Percent_Identity=23.8754325259516, Blast_Score=122, Evalue=8e-28, Organism=Caenorhabditis elegans, GI17531299, Length=578, Percent_Identity=23.8754325259516, Blast_Score=121, Evalue=9e-28, Organism=Saccharomyces cerevisiae, GI6323755, Length=590, Percent_Identity=41.864406779661, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6320816, Length=488, Percent_Identity=23.3606557377049, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI19922626, Length=565, Percent_Identity=26.0176991150442, Blast_Score=177, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64318; Mature: 64187
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTSRSFSKGSSKHENPVWITGADALMDSLKIHGVKVIFGYPGGAILPIYDAVHKAEQE CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHEECEEEEEEECCCCCEEHHHHHHHHHHHH GWLKHYMVRHEQGGSHAADGYARSTGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVT HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE GQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRNPSDIAKVVSEAFFIASSGRPGPVLID CCCCCCCCCCCCCCCCCEEEEEEEHHCCEEEEECHHHHHHHHHHHEEEECCCCCCCEEEE IPKDVGQEFFNYQRVLPGEIIPKGFKRNGDINDFDINKAIKLIEDSERPLLYVGGGAISS CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCC GAHDEIRTLAKNYQIPVTTTLMGKGAFDEKDNLSVGMLGMHGTAYANFAVTECDLLIAVG CCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEEEEEC ARFDDRVTGKLDTFAPNAKVIHIDIDPAEVNKNRRVDVAIVSDVSKAILKINEQSLKNKF CCCCCCCCCCEECCCCCCEEEEEECCHHHCCCCCEEEEEEHHHHHHHHHHHCHHHHCCCE TCRTKNWLEKIDFWKNKHPLYDPPKEGEIYPQEVLLKVRELSPEAYVTTDVGQHQMWAAQ EECHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHH YLRNSPRKWISSAGLGTMGFGLPAAIGVKAALPNSDVICIAGDASVLMNIQELGTLSQYG HHHCCHHHHHHHCCCCCCCCCCHHHHCEEEECCCCCEEEEECCHHHHHHHHHHCCHHHCC LKVKLIIINNRWQGMVRQWQESFYDERYSSSDMSCGEPDFVKLAESFGVKGYLISDRKQL CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHH QNELKSALDHDGPALINILVRRGENCYPMVPPGKSNAQMVGYVNCED HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure TLTSRSFSKGSSKHENPVWITGADALMDSLKIHGVKVIFGYPGGAILPIYDAVHKAEQE CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHEECEEEEEEECCCCCEEHHHHHHHHHHHH GWLKHYMVRHEQGGSHAADGYARSTGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVT HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE GQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRNPSDIAKVVSEAFFIASSGRPGPVLID CCCCCCCCCCCCCCCCCEEEEEEEHHCCEEEEECHHHHHHHHHHHEEEECCCCCCCEEEE IPKDVGQEFFNYQRVLPGEIIPKGFKRNGDINDFDINKAIKLIEDSERPLLYVGGGAISS CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCC GAHDEIRTLAKNYQIPVTTTLMGKGAFDEKDNLSVGMLGMHGTAYANFAVTECDLLIAVG CCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEEEEEC ARFDDRVTGKLDTFAPNAKVIHIDIDPAEVNKNRRVDVAIVSDVSKAILKINEQSLKNKF CCCCCCCCCCEECCCCCCEEEEEECCHHHCCCCCEEEEEEHHHHHHHHHHHCHHHHCCCE TCRTKNWLEKIDFWKNKHPLYDPPKEGEIYPQEVLLKVRELSPEAYVTTDVGQHQMWAAQ EECHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHH YLRNSPRKWISSAGLGTMGFGLPAAIGVKAALPNSDVICIAGDASVLMNIQELGTLSQYG HHHCCHHHHHHHCCCCCCCCCCHHHHCEEEECCCCCEEEEECCHHHHHHHHHHCCHHHCC LKVKLIIINNRWQGMVRQWQESFYDERYSSSDMSCGEPDFVKLAESFGVKGYLISDRKQL CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHH QNELKSALDHDGPALINILVRRGENCYPMVPPGKSNAQMVGYVNCED HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]