Click here to switch to the map view.

The map label for this gene is hflC

Identifier: 123968075

GI number: 123968075

Start: 466966

End: 467769

Strand: Direct

Name: hflC

Synonym: A9601_05381

Alternate gene names: NA

Gene position: 466966-467769 (Clockwise)

Preceding gene: 123968074

Following gene: 123968078

Centisome position: 27.96

GC content: 36.07

Gene sequence:

>804_bases
ATGTCAACATCCTTTAAAAATGTCACACCAACAGGTCCTGGTGGGACAGCAACTCTTTTGATTGTATTGTCTTTTACTGG
CTTTCTTTTACTTACCCAATCTCTTTTTGTTGTGCCTTCAGGACAAGTTGCAGTTGTTACAACATTAGGGAAAGTAAGTG
GACCCTCTAGGAGAGCTGGTTTAAACTTTAAACTTCCATTTATTCAGTCTGTATATCCATTTGATATAAAAACTCAAGTT
CAACCTGAAAAATTTGAAACTTTAACTAAAGATCTTCAAGTTATTAGAGCTACCGCTACTGTTAAGTACTCAGTAAAACC
TAACGAAGCAGGAAGGATTTTCGCTACTATTGCAAGCAGAAATAGCGATGTTTATCAAAAAATTGTTCAGCCATCTTTGC
TAAAAGCTCTTAAATCAGTTTTTTCTCAATATGAGCTAGAAACAATTGCTACTGAATTCGCAGTGATTTCTGAGAAAGTA
GGAGATACTGTTGCACAAGAACTTAATTCATTCGATTACGTAGATGTTAAAAGTTTAGATCTAACTGGATTAGAGATCGC
TGAAGAATATAGAGCTGCTATTGAACAAAAGCAAATAGCTGGTCAGCAATTACTCAGAGCAAAGACAGAAGTTGAAATTG
CAGAACAAGAAGCACTTAGATATGAAACATTAAATAGAAGTCTCGACGATCAGGTACTTTTCAAATTATTTCTCGACAAA
TGGGATGGTAGTACACAAGTTGTTCCTGGATTGCCAGGTTCAGAAGGAGGTTCTCCTCCAGTAATAGTTGGTGGTAGAAG
ATAA

Upstream 100 bases:

>100_bases
GTATTTAAATTCACAATTATTAAAAAAATATTTTAATTAAATGTCTTATTAATGCACTAATTAGTCTATTTAAATATGAT
TAATTAAAAGAAAAAATTTA

Downstream 100 bases:

>100_bases
TTATTTAAATATAATTATTCTAAAGTTTTAATCATTTACTTATCTTTCTTTAAAGAAAGATAAGTAGATGATTATTTTTT
TATTGCATTGAAAGATTCAT

Product: Band 7 protein

Products: NA

Alternate protein names: SPFH Domain-Containing Protein/Band 7 Family Protein; Band 7 Family Protein; Membrane Protease Subunit; Band 7 Protein Like; Prohibitin Family Protein; SPFH Domain / Band 7 Family Protein; HflC Protein; Membrane Protease Complex Subunit; Spfh Domain Protein

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSTSFKNVTPTGPGGTATLLIVLSFTGFLLLTQSLFVVPSGQVAVVTTLGKVSGPSRRAGLNFKLPFIQSVYPFDIKTQV
QPEKFETLTKDLQVIRATATVKYSVKPNEAGRIFATIASRNSDVYQKIVQPSLLKALKSVFSQYELETIATEFAVISEKV
GDTVAQELNSFDYVDVKSLDLTGLEIAEEYRAAIEQKQIAGQQLLRAKTEVEIAEQEALRYETLNRSLDDQVLFKLFLDK
WDGSTQVVPGLPGSEGGSPPVIVGGRR

Sequences:

>Translated_267_residues
MSTSFKNVTPTGPGGTATLLIVLSFTGFLLLTQSLFVVPSGQVAVVTTLGKVSGPSRRAGLNFKLPFIQSVYPFDIKTQV
QPEKFETLTKDLQVIRATATVKYSVKPNEAGRIFATIASRNSDVYQKIVQPSLLKALKSVFSQYELETIATEFAVISEKV
GDTVAQELNSFDYVDVKSLDLTGLEIAEEYRAAIEQKQIAGQQLLRAKTEVEIAEQEALRYETLNRSLDDQVLFKLFLDK
WDGSTQVVPGLPGSEGGSPPVIVGGRR
>Mature_266_residues
STSFKNVTPTGPGGTATLLIVLSFTGFLLLTQSLFVVPSGQVAVVTTLGKVSGPSRRAGLNFKLPFIQSVYPFDIKTQVQ
PEKFETLTKDLQVIRATATVKYSVKPNEAGRIFATIASRNSDVYQKIVQPSLLKALKSVFSQYELETIATEFAVISEKVG
DTVAQELNSFDYVDVKSLDLTGLEIAEEYRAAIEQKQIAGQQLLRAKTEVEIAEQEALRYETLNRSLDDQVLFKLFLDKW
DGSTQVVPGLPGSEGGSPPVIVGGRR

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6005854, Length=227, Percent_Identity=28.6343612334802, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI221307584, Length=227, Percent_Identity=28.6343612334802, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193205005, Length=187, Percent_Identity=27.807486631016, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6321571, Length=188, Percent_Identity=28.1914893617021, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24585145, Length=194, Percent_Identity=27.8350515463918, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24585147, Length=194, Percent_Identity=27.8350515463918, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29181; Mature: 29050

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSFKNVTPTGPGGTATLLIVLSFTGFLLLTQSLFVVPSGQVAVVTTLGKVSGPSRRAG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCHHCC
LNFKLPFIQSVYPFDIKTQVQPEKFETLTKDLQVIRATATVKYSVKPNEAGRIFATIASR
CEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEEEEECC
NSDVYQKIVQPSLLKALKSVFSQYELETIATEFAVISEKVGDTVAQELNSFDYVDVKSLD
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
LTGLEIAEEYRAAIEQKQIAGQQLLRAKTEVEIAEQEALRYETLNRSLDDQVLFKLFLDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
WDGSTQVVPGLPGSEGGSPPVIVGGRR
CCCCCEEECCCCCCCCCCCCEEECCCC
>Mature Secondary Structure 
STSFKNVTPTGPGGTATLLIVLSFTGFLLLTQSLFVVPSGQVAVVTTLGKVSGPSRRAG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCHHCC
LNFKLPFIQSVYPFDIKTQVQPEKFETLTKDLQVIRATATVKYSVKPNEAGRIFATIASR
CEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEEEEECC
NSDVYQKIVQPSLLKALKSVFSQYELETIATEFAVISEKVGDTVAQELNSFDYVDVKSLD
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
LTGLEIAEEYRAAIEQKQIAGQQLLRAKTEVEIAEQEALRYETLNRSLDDQVLFKLFLDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
WDGSTQVVPGLPGSEGGSPPVIVGGRR
CCCCCEEECCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA