| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is map [C]
Identifier: 123968069
GI number: 123968069
Start: 462692
End: 463531
Strand: Direct
Name: map [C]
Synonym: A9601_05321
Alternate gene names: 123968069
Gene position: 462692-463531 (Clockwise)
Preceding gene: 123968064
Following gene: 123968071
Centisome position: 27.71
GC content: 35.6
Gene sequence:
>840_bases ATGAGACATTTTGCAGATCTTTTGTTAAATAAAAATAATTCCAAAGCTAATGATCAAGTTCCTTTTATTCAGAGGAGAAG AGGAATCGAGATAAAGTCTTCACGGGAAATAAATTTGATGAAAAAATCTAGCAGAATTGTAGCTACCGTTTTGAGAGAAA TTAATGACTTAATTAAACCTGGAATGAGTACAAAAGATTTAGATGATTTCGCGGAAAAGAGGATAAAAAGTTTTGGAGCT GTGCCAAGTTTCAAGGGCTACCATGGATTCCCTTCTAGTATTTGTTCTAGTATTAATAATGAGGTTGTCCACGGTATTCC AAGTAAAAATAAAATAATTAAAAATGGTGACTTGGTTAAAATTGATACAGGGGCATATTTAGATGGTTTCCATGGAGATA GTTGTATATCAATTTGTGTAGGAGAAGTTAGTCCAAAGGCTCAAAAACTTAGTGATGTAGCTTTTAAAGCATTGTATGCG GGCCTTTCGAAAATCAAAGCCGGGAATACACTTCTTGATGTGGCTGGGGAAATCGAAGACGTTGTCGTAAAAAATGGCTT TAGTGTTGTAGAAGACTACACAGGTCATGGAGTTGGACGAAATCTTCATGAAGAACCATCGGTATTTAATTTTCGGACCA AAGAATTGCCTAACGTCGTCCTTCGCGAAGGAATGACATTAGCGGTGGAACCTATTGTTAATGAAGGGACTAAATTTTGC AAAACACTAAATGATAGATGGACCGTAATAACAAAAGATGGAAAACTATCTGCCCAATGGGAGCATACAATAGTTGTTTT AAAAGATGGTATTGAAATATTGACAGATCGAGATTTCTAG
Upstream 100 bases:
>100_bases TTCATTTTCGTTTCTTTCCTATTGTTATTGATAGATTTAAGGTAGCCAAGATCATAAAGGCTATTTTGAAGATATTTACT TATTACTATTATTTATTCCA
Downstream 100 bases:
>100_bases GCACTAAGATTTATATTTATAGATAATTTGGCAATATAAATAATTAAAAAATTCTTTCAATGGGAAAAGTACATATGTTA AAGGGTTTGGACTAATTATT
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MRHFADLLLNKNNSKANDQVPFIQRRRGIEIKSSREINLMKKSSRIVATVLREINDLIKPGMSTKDLDDFAEKRIKSFGA VPSFKGYHGFPSSICSSINNEVVHGIPSKNKIIKNGDLVKIDTGAYLDGFHGDSCISICVGEVSPKAQKLSDVAFKALYA GLSKIKAGNTLLDVAGEIEDVVVKNGFSVVEDYTGHGVGRNLHEEPSVFNFRTKELPNVVLREGMTLAVEPIVNEGTKFC KTLNDRWTVITKDGKLSAQWEHTIVVLKDGIEILTDRDF
Sequences:
>Translated_279_residues MRHFADLLLNKNNSKANDQVPFIQRRRGIEIKSSREINLMKKSSRIVATVLREINDLIKPGMSTKDLDDFAEKRIKSFGA VPSFKGYHGFPSSICSSINNEVVHGIPSKNKIIKNGDLVKIDTGAYLDGFHGDSCISICVGEVSPKAQKLSDVAFKALYA GLSKIKAGNTLLDVAGEIEDVVVKNGFSVVEDYTGHGVGRNLHEEPSVFNFRTKELPNVVLREGMTLAVEPIVNEGTKFC KTLNDRWTVITKDGKLSAQWEHTIVVLKDGIEILTDRDF >Mature_279_residues MRHFADLLLNKNNSKANDQVPFIQRRRGIEIKSSREINLMKKSSRIVATVLREINDLIKPGMSTKDLDDFAEKRIKSFGA VPSFKGYHGFPSSICSSINNEVVHGIPSKNKIIKNGDLVKIDTGAYLDGFHGDSCISICVGEVSPKAQKLSDVAFKALYA GLSKIKAGNTLLDVAGEIEDVVVKNGFSVVEDYTGHGVGRNLHEEPSVFNFRTKELPNVVLREGMTLAVEPIVNEGTKFC KTLNDRWTVITKDGKLSAQWEHTIVVLKDGIEILTDRDF
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI40385867, Length=248, Percent_Identity=34.2741935483871, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI164420681, Length=249, Percent_Identity=35.3413654618474, Blast_Score=162, Evalue=3e-40, Organism=Escherichia coli, GI1786364, Length=251, Percent_Identity=45.0199203187251, Blast_Score=217, Evalue=5e-58, Organism=Caenorhabditis elegans, GI71996291, Length=253, Percent_Identity=34.7826086956522, Blast_Score=158, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6323273, Length=255, Percent_Identity=35.6862745098039, Blast_Score=170, Evalue=2e-43, Organism=Drosophila melanogaster, GI24583427, Length=246, Percent_Identity=36.1788617886179, Blast_Score=160, Evalue=8e-40, Organism=Drosophila melanogaster, GI21355531, Length=253, Percent_Identity=35.5731225296443, Blast_Score=155, Evalue=2e-38,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 30889; Mature: 30889
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHFADLLLNKNNSKANDQVPFIQRRRGIEIKSSREINLMKKSSRIVATVLREINDLIKP CCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC GMSTKDLDDFAEKRIKSFGAVPSFKGYHGFPSSICSSINNEVVHGIPSKNKIIKNGDLVK CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHEECCCCCCCEEECCCEEE IDTGAYLDGFHGDSCISICVGEVSPKAQKLSDVAFKALYAGLSKIKAGNTLLDVAGEIED EECCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VVVKNGFSVVEDYTGHGVGRNLHEEPSVFNFRTKELPNVVLREGMTLAVEPIVNEGTKFC HHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCEEEECCHHHHHHHHH KTLNDRWTVITKDGKLSAQWEHTIVVLKDGIEILTDRDF HHCCCCEEEEEECCCEEEEECEEEEEEECCCEEECCCCC >Mature Secondary Structure MRHFADLLLNKNNSKANDQVPFIQRRRGIEIKSSREINLMKKSSRIVATVLREINDLIKP CCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC GMSTKDLDDFAEKRIKSFGAVPSFKGYHGFPSSICSSINNEVVHGIPSKNKIIKNGDLVK CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHEECCCCCCCEEECCCEEE IDTGAYLDGFHGDSCISICVGEVSPKAQKLSDVAFKALYAGLSKIKAGNTLLDVAGEIED EECCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VVVKNGFSVVEDYTGHGVGRNLHEEPSVFNFRTKELPNVVLREGMTLAVEPIVNEGTKFC HHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCEEEECCHHHHHHHHH KTLNDRWTVITKDGKLSAQWEHTIVVLKDGIEILTDRDF HHCCCCEEEEEECCCEEEEECEEEEEEECCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]