| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is birA [C]
Identifier: 123968025
GI number: 123968025
Start: 422492
End: 423241
Strand: Direct
Name: birA [C]
Synonym: A9601_04881
Alternate gene names: 123968025
Gene position: 422492-423241 (Clockwise)
Preceding gene: 123968023
Following gene: 123968028
Centisome position: 25.3
GC content: 29.6
Gene sequence:
>750_bases GTGAAAGTTATTGGACCTGCAGCTAAAACAGTTTTTTATTTAAAAAAAATTCAGGGTCAATATCCAACCTGGACACTTCA TTACAAAATAAAATGTAAAAGTACCGAAAATGAGCTAACAAACTTGCTTGAATATTCTGAAATCAAGAAAAACCACCCAG TAGCGATAATCGCAAGAGAACAATTCTCAGGAGTTGGCCAAAATTCAAAAACTTGGGTTTCTCCAAAAGGCGGGATTTGG TTAAGTGCAGCTTACCCAATATTTTTAAAAGAATTTGAATATCAAATATTTAATTTGTCATTAGGTATTAAGCTATGTGA AATGCTTAGACAAGAGAATATAAATGTTTGTTTGAAATGGCCAAATGATATTTTTTTTGGTTCAAAAAAGTTGATTGGAT TTTTACCAAGGGTGATAACAAGAGGCAAAAAAATTATCTATGTAAGATTAGGACTTGGCATGAATGTTTTAAATTACACC CCATCAGAAGGTATTTCATTATCAAAAGTACTTCAAACTAAGAATATTAATCAATATTATTGGACAGCCAAAGTTCTTAA AGCCTTTTATGACTCAATTGAATGTAATAAGAAAAAAGAATATGTGATTAAATCTGCAAATAAGTTTCTTACTAAAAGTT TTTTACCTAGTGGTTATTGTCCTGATTCATGGAAAATTAAAGATATTGATTCGAATGGAAATTTAAGAATTGAAAATGAA ACTCAACTGAAGGTAATTAGAAGGTTTTGA
Upstream 100 bases:
>100_bases CTATTGGCAAATACTTTTTGTCCAATTTGTAAAATTTACTTATTAAGACTAAAGTTAATCTAATCTTTAAAAAGATGCTC GTTGTTTTAATAAAGAATTT
Downstream 100 bases:
>100_bases ATTTAATTAACTTTTAATTCGACTATTCTTCCATCCTTAAATTTGGCTATTTTTTTTGCGCGATTTGCAACTTCATCTTC ATGCGTAACCAAAACTATAG
Product: putative biotin--acetyl-CoA-carboxylase ligase
Products: AMP; diphosphate; [acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
Alternate protein names: Biotin/Acetyl-CoA-Carboxylase Ligase; Biotin-(Acetyl-CoA Carboxylase) Ligase; Biotin-(Acetyl-CoA-Carboxylase) Ligase; Biotin-[Acetyl-CoA-Carboxylase] Ligase; Biotin-(Acetyl-CoA Carboxylase) Synthetase; Biotin; Biotin Ligase; Biotin Acetyl-CoA Carboxylase Ligase; Biotin Acetyl CoA Carboxylase Ligase
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKVIGPAAKTVFYLKKIQGQYPTWTLHYKIKCKSTENELTNLLEYSEIKKNHPVAIIAREQFSGVGQNSKTWVSPKGGIW LSAAYPIFLKEFEYQIFNLSLGIKLCEMLRQENINVCLKWPNDIFFGSKKLIGFLPRVITRGKKIIYVRLGLGMNVLNYT PSEGISLSKVLQTKNINQYYWTAKVLKAFYDSIECNKKKEYVIKSANKFLTKSFLPSGYCPDSWKIKDIDSNGNLRIENE TQLKVIRRF
Sequences:
>Translated_249_residues MKVIGPAAKTVFYLKKIQGQYPTWTLHYKIKCKSTENELTNLLEYSEIKKNHPVAIIAREQFSGVGQNSKTWVSPKGGIW LSAAYPIFLKEFEYQIFNLSLGIKLCEMLRQENINVCLKWPNDIFFGSKKLIGFLPRVITRGKKIIYVRLGLGMNVLNYT PSEGISLSKVLQTKNINQYYWTAKVLKAFYDSIECNKKKEYVIKSANKFLTKSFLPSGYCPDSWKIKDIDSNGNLRIENE TQLKVIRRF >Mature_249_residues MKVIGPAAKTVFYLKKIQGQYPTWTLHYKIKCKSTENELTNLLEYSEIKKNHPVAIIAREQFSGVGQNSKTWVSPKGGIW LSAAYPIFLKEFEYQIFNLSLGIKLCEMLRQENINVCLKWPNDIFFGSKKLIGFLPRVITRGKKIIYVRLGLGMNVLNYT PSEGISLSKVLQTKNINQYYWTAKVLKAFYDSIECNKKKEYVIKSANKFLTKSFLPSGYCPDSWKIKDIDSNGNLRIENE TQLKVIRRF
Specific function: Bira Acts Both As A Biotin-Operon Repressor And As The Enzyme That Synthesizes The Corepressor, Acetyl-CoA:Carbon- Dioxide Ligase. This Protein Also Activates Biotin To Form Biotinyl-5'-Adenylate And Transfers The Biotin Moiety To Biotin-Accepting Protei
COG id: COG0340
COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.3.4.15
Molecular weight: Translated: 28786; Mature: 28786
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIGPAAKTVFYLKKIQGQYPTWTLHYKIKCKSTENELTNLLEYSEIKKNHPVAIIARE CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEH QFSGVGQNSKTWVSPKGGIWLSAAYPIFLKEFEYQIFNLSLGIKLCEMLRQENINVCLKW HCCCCCCCCCEEECCCCCEEEEECCHHHHHHHEEEEEEEEHHHHHHHHHHHCCCEEEEEC PNDIFFGSKKLIGFLPRVITRGKKIIYVRLGLGMNVLNYTPSEGISLSKVLQTKNINQYY CCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHH WTAKVLKAFYDSIECNKKKEYVIKSANKFLTKSFLPSGYCPDSWKIKDIDSNGNLRIENE HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEECCC TQLKVIRRF HHHHHEECC >Mature Secondary Structure MKVIGPAAKTVFYLKKIQGQYPTWTLHYKIKCKSTENELTNLLEYSEIKKNHPVAIIARE CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEH QFSGVGQNSKTWVSPKGGIWLSAAYPIFLKEFEYQIFNLSLGIKLCEMLRQENINVCLKW HCCCCCCCCCEEECCCCCEEEEECCHHHHHHHEEEEEEEEHHHHHHHHHHHCCCEEEEEC PNDIFFGSKKLIGFLPRVITRGKKIIYVRLGLGMNVLNYTPSEGISLSKVLQTKNINQYY CCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHH WTAKVLKAFYDSIECNKKKEYVIKSANKFLTKSFLPSGYCPDSWKIKDIDSNGNLRIENE HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEECCC TQLKVIRRF HHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; biotin; apo-[acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
Specific reaction: ATP + biotin + apo-[acetyl-CoA:carbon-dioxide ligase (ADP-forming)] = AMP + diphosphate + [acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
General reaction: Amination; Carboxylic acid formation (carboxamide formation [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA