| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is yidD [C]
Identifier: 123967998
GI number: 123967998
Start: 401918
End: 402109
Strand: Direct
Name: yidD [C]
Synonym: A9601_04611
Alternate gene names: 123967998
Gene position: 401918-402109 (Clockwise)
Preceding gene: 123967993
Following gene: 123967999
Centisome position: 24.07
GC content: 39.06
Gene sequence:
>192_bases ATGATTTCGTTTTATCAAAAGTGGTTTTCTCCTTTTTTTGGACCAAGATGCAGATTTATTCCAAGTTGCAGCTCTTATGG ATATGAGGCAATTACTAGACATGGTCCTTGGAAGGGAGGGTGGTTAACTTTAAAAAGATTAAGTAGATGTCATCCTTTAA CTCCCTGTGGATGTGACCCTGTGCCTGACTAA
Upstream 100 bases:
>100_bases TGATTAAATTCAATTAAACTAATTACTACTGGAAATATTATTTTACATCATTAAAGTGTTGAAAACTATTAATAAATCAA TTACTTCTATACTTCTTTTT
Downstream 100 bases:
>100_bases ATGAATGAAAATATTTATTTTTGTTAGGCAGGGATGTTGCCTTTGTGATTCATTAAAAAACAAACTGGCAAAAATAAATC TTAATGAGTTATTCCCTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLKRLSRCHPLTPCGCDPVPD
Sequences:
>Translated_63_residues MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLKRLSRCHPLTPCGCDPVPD >Mature_63_residues MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLKRLSRCHPLTPCGCDPVPD
Specific function: Unknown
COG id: COG0759
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0161 family [H]
Homologues:
Organism=Escherichia coli, GI87082322, Length=62, Percent_Identity=59.6774193548387, Blast_Score=82, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002696 - ProDom: PD004225 [H]
Pfam domain/function: PF01809 DUF37 [H]
EC number: NA
Molecular weight: Translated: 7283; Mature: 7283
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 7.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLKRLSRCHPLTPCGCDP CCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC VPD CCC >Mature Secondary Structure MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLKRLSRCHPLTPCGCDP CCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC VPD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA