Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 123967998

GI number: 123967998

Start: 401918

End: 402109

Strand: Direct

Name: yidD [C]

Synonym: A9601_04611

Alternate gene names: 123967998

Gene position: 401918-402109 (Clockwise)

Preceding gene: 123967993

Following gene: 123967999

Centisome position: 24.07

GC content: 39.06

Gene sequence:

>192_bases
ATGATTTCGTTTTATCAAAAGTGGTTTTCTCCTTTTTTTGGACCAAGATGCAGATTTATTCCAAGTTGCAGCTCTTATGG
ATATGAGGCAATTACTAGACATGGTCCTTGGAAGGGAGGGTGGTTAACTTTAAAAAGATTAAGTAGATGTCATCCTTTAA
CTCCCTGTGGATGTGACCCTGTGCCTGACTAA

Upstream 100 bases:

>100_bases
TGATTAAATTCAATTAAACTAATTACTACTGGAAATATTATTTTACATCATTAAAGTGTTGAAAACTATTAATAAATCAA
TTACTTCTATACTTCTTTTT

Downstream 100 bases:

>100_bases
ATGAATGAAAATATTTATTTTTGTTAGGCAGGGATGTTGCCTTTGTGATTCATTAAAAAACAAACTGGCAAAAATAAATC
TTAATGAGTTATTCCCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLKRLSRCHPLTPCGCDPVPD

Sequences:

>Translated_63_residues
MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLKRLSRCHPLTPCGCDPVPD
>Mature_63_residues
MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLKRLSRCHPLTPCGCDPVPD

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family [H]

Homologues:

Organism=Escherichia coli, GI87082322, Length=62, Percent_Identity=59.6774193548387, Blast_Score=82, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002696
- ProDom:   PD004225 [H]

Pfam domain/function: PF01809 DUF37 [H]

EC number: NA

Molecular weight: Translated: 7283; Mature: 7283

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
7.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLKRLSRCHPLTPCGCDP
CCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
VPD
CCC
>Mature Secondary Structure
MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLKRLSRCHPLTPCGCDP
CCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
VPD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA