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The map label for this gene is yaeJ [H]

Identifier: 123967922

GI number: 123967922

Start: 343362

End: 343799

Strand: Direct

Name: yaeJ [H]

Synonym: A9601_03851

Alternate gene names: 123967922

Gene position: 343362-343799 (Clockwise)

Preceding gene: 123967919

Following gene: 123967923

Centisome position: 20.56

GC content: 26.48

Gene sequence:

>438_bases
ATGGATTTGCAAATTACTAAAACATTAGTAATACCATCCAACGAAATTAAATGGCGATTTTCCAGATCTTCAGGTCCTGG
AGGACAGAATGTAAATAAAATTGAAAGCAGAGTAGAGATTATTTTTAATTTAGAAGATTCAAAAGTACTAAATGATTATC
AGAAAGCAATTCTCAAGATTAATTTGAAAAAAAAATTAGTGAAAAATTGTTTATGTTTATCGGTTCAAGAACACAGAAAT
CAATTACTAAATAGGCAGCTAGCCTTAATCAAATTTAGTTCAATCATAAAAGATGGCTTAAATAAACCATTTAAAATTAG
AAAATTTACAAAACCTACTAAAACATCGCAAAAGAAAAGAGTTGAGTTTAAGAGAAAACAAGGCGTATTGAAAAAAAGTA
GGCAAAAAGAAAAAATATATCAATTATTAGAAAAATAG

Upstream 100 bases:

>100_bases
TTTACCTAACATAACCGCACAGTATTTACCGATCAAATTTCAAGATATATCTTAAAGTATTAGAGATAATTCTAAAAATC
TAAATTAAGAAGAACTAAAA

Downstream 100 bases:

>100_bases
ATATTTCCCTCGCAAATCCTAATGAAAGCATATGATTAATTTAATTTTGGTTTATTGAATTCAAATAATGATTTTTGGTT
GATTGACTCCAATTTTGTAG

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDLQITKTLVIPSNEIKWRFSRSSGPGGQNVNKIESRVEIIFNLEDSKVLNDYQKAILKINLKKKLVKNCLCLSVQEHRN
QLLNRQLALIKFSSIIKDGLNKPFKIRKFTKPTKTSQKKRVEFKRKQGVLKKSRQKEKIYQLLEK

Sequences:

>Translated_145_residues
MDLQITKTLVIPSNEIKWRFSRSSGPGGQNVNKIESRVEIIFNLEDSKVLNDYQKAILKINLKKKLVKNCLCLSVQEHRN
QLLNRQLALIKFSSIIKDGLNKPFKIRKFTKPTKTSQKKRVEFKRKQGVLKKSRQKEKIYQLLEK
>Mature_145_residues
MDLQITKTLVIPSNEIKWRFSRSSGPGGQNVNKIESRVEIIFNLEDSKVLNDYQKAILKINLKKKLVKNCLCLSVQEHRN
QLLNRQLALIKFSSIIKDGLNKPFKIRKFTKPTKTSQKKRVEFKRKQGVLKKSRQKEKIYQLLEK

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=132, Percent_Identity=29.5454545454545, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 17009; Mature: 17009

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQITKTLVIPSNEIKWRFSRSSGPGGQNVNKIESRVEIIFNLEDSKVLNDYQKAILKI
CCCEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHH
NLKKKLVKNCLCLSVQEHRNQLLNRQLALIKFSSIIKDGLNKPFKIRKFTKPTKTSQKKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
VEFKRKQGVLKKSRQKEKIYQLLEK
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLQITKTLVIPSNEIKWRFSRSSGPGGQNVNKIESRVEIIFNLEDSKVLNDYQKAILKI
CCCEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHH
NLKKKLVKNCLCLSVQEHRNQLLNRQLALIKFSSIIKDGLNKPFKIRKFTKPTKTSQKKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
VEFKRKQGVLKKSRQKEKIYQLLEK
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]