| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is glmM [H]
Identifier: 123967838
GI number: 123967838
Start: 277581
End: 279035
Strand: Direct
Name: glmM [H]
Synonym: A9601_03011
Alternate gene names: 123967838
Gene position: 277581-279035 (Clockwise)
Preceding gene: 123967836
Following gene: 123967839
Centisome position: 16.62
GC content: 30.58
Gene sequence:
>1455_bases TTGAGAGCTGATAAATTAGATAAGATAAAATTTGGAACTGATGGTTGGAGAGGAATTATTGGTTTTGACTTTAACCTGTC CAATCTTTCAAGAGTTGTTGTAGCTGCATGTCAGGAGTTACATTATCAATACTATAAAGAAGTTAATTCAAAGAAAATTA TTATTGGATATGATCGTAGATTTATGGCTTGTGAATTCGCCAAGCAAATAGTGCCCTTTGTAAGAGGATGTGGTTTCGAA CCGATCTTATCTGATGGCTTTGTTACAACGCCCTCTTGTAGCTTCTATGCCAAAGAAGTCGGTTGTCTTGGAGCGTTAGT AATTACAGCAAGTCATAATCCATATAATTGGCTAGGTCTGAAAATAAAGAGCTTAAATGGATGTTCTGTTGACGAATCTT TTACAAGAGAAGTTGAAAAAAGATTAATGCTTGGAAATTCAATTGAAAAAATAGATGGTATTACTCAGTTGGTAGATATT AAGAAATTTCATTTAGATAGAATTAAATCCCTTTTTGATATTAACTATATTTCCAAGAGATTAAAAAAAATGAAATTGAA AATTTTTGTAGATTCTATGCATGGTTCAGCTGCAAATTGTATGGCTGAGATTTTTGCTTCTAATGATTTAGAGGTTATTT CAGAAATCAGGAAAGATGCTGATCCTTTTTTTGGAGGAAAACCTCCTGAACCTCTTCTGAATTATGCAGATGATCTAAAA CAAACACTAATGAAAAATTCAACAAATGAAGTGAAAACTTTAGGAATTATATTTGATGGTGATGGTGATAGAATTGCGGC AATTGATGAAAAAGGAAGATACTCTAGTACTCAAGATTTACTCCCATACTTTATTAAATATTTGGGCGAAATTAAAAATA ATTCTTATCCAGTTTTAAAGACAGTTAGTGGTTCAGATATTATTAAAAATATTTCAGAGAGTCAAAATAGAGATGTTTTT GAACTTCCGGTTGGCTTTAAATATATTGCTGAAAAAATGATTAAAGGAAAAATATTTATTGGAGGAGAGGAATCTGGGGG AGTTGGTTTTGGTGACTTTATGCCTGAAAGAGATGCTCTATATGCAGCAATGGTTTTACTAAATGGAATTGCTGAAAAAT CTCAATATTTATATGAAACTTTAGATGAAATTCAAGAAGACTTTGGGCCAAGTTTTTATAAAAGAATTGATATTAAATTT CCAAATCAGTCAGAAAAAAATAACGTAAAAGAATTTATCATAGATAATATTCCTGAGAATATTAATAATCACAAGTTAAA AAGTATCTCAAAGATCGATGGAATAAAATTGAGAATTGATAAAAATTTTTGGCTTCTTTTTAGGTTTTCAGGAACGGAAC CTCTTTTAAGGTTATATTGTGAAGCACCAAAAGAATCTTATCTAATTGAGGTATTAGAGTGGGGGCAAGAATTTATAAAT TTGGCAAGAAAATAA
Upstream 100 bases:
>100_bases TTTAAATGAAGAGAATTCAAATTATTTTTTAAGGGCGGTTTTAAAATTTACTCATATAAATTAGTATAGATAATTAGAAG AAATCAAGGAAATTTGAAAT
Downstream 100 bases:
>100_bases GGATGAAAAATTTATATTTAGCGAGTAAGAATAAAGGTAAAATTGAAGAATATAAGAAATTGCTCGCTGGAGTTAATTGT AAATTGTTACTCCAGCCAGA
Product: phosphotransferase superclass
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MRADKLDKIKFGTDGWRGIIGFDFNLSNLSRVVVAACQELHYQYYKEVNSKKIIIGYDRRFMACEFAKQIVPFVRGCGFE PILSDGFVTTPSCSFYAKEVGCLGALVITASHNPYNWLGLKIKSLNGCSVDESFTREVEKRLMLGNSIEKIDGITQLVDI KKFHLDRIKSLFDINYISKRLKKMKLKIFVDSMHGSAANCMAEIFASNDLEVISEIRKDADPFFGGKPPEPLLNYADDLK QTLMKNSTNEVKTLGIIFDGDGDRIAAIDEKGRYSSTQDLLPYFIKYLGEIKNNSYPVLKTVSGSDIIKNISESQNRDVF ELPVGFKYIAEKMIKGKIFIGGEESGGVGFGDFMPERDALYAAMVLLNGIAEKSQYLYETLDEIQEDFGPSFYKRIDIKF PNQSEKNNVKEFIIDNIPENINNHKLKSISKIDGIKLRIDKNFWLLFRFSGTEPLLRLYCEAPKESYLIEVLEWGQEFIN LARK
Sequences:
>Translated_484_residues MRADKLDKIKFGTDGWRGIIGFDFNLSNLSRVVVAACQELHYQYYKEVNSKKIIIGYDRRFMACEFAKQIVPFVRGCGFE PILSDGFVTTPSCSFYAKEVGCLGALVITASHNPYNWLGLKIKSLNGCSVDESFTREVEKRLMLGNSIEKIDGITQLVDI KKFHLDRIKSLFDINYISKRLKKMKLKIFVDSMHGSAANCMAEIFASNDLEVISEIRKDADPFFGGKPPEPLLNYADDLK QTLMKNSTNEVKTLGIIFDGDGDRIAAIDEKGRYSSTQDLLPYFIKYLGEIKNNSYPVLKTVSGSDIIKNISESQNRDVF ELPVGFKYIAEKMIKGKIFIGGEESGGVGFGDFMPERDALYAAMVLLNGIAEKSQYLYETLDEIQEDFGPSFYKRIDIKF PNQSEKNNVKEFIIDNIPENINNHKLKSISKIDGIKLRIDKNFWLLFRFSGTEPLLRLYCEAPKESYLIEVLEWGQEFIN LARK >Mature_484_residues MRADKLDKIKFGTDGWRGIIGFDFNLSNLSRVVVAACQELHYQYYKEVNSKKIIIGYDRRFMACEFAKQIVPFVRGCGFE PILSDGFVTTPSCSFYAKEVGCLGALVITASHNPYNWLGLKIKSLNGCSVDESFTREVEKRLMLGNSIEKIDGITQLVDI KKFHLDRIKSLFDINYISKRLKKMKLKIFVDSMHGSAANCMAEIFASNDLEVISEIRKDADPFFGGKPPEPLLNYADDLK QTLMKNSTNEVKTLGIIFDGDGDRIAAIDEKGRYSSTQDLLPYFIKYLGEIKNNSYPVLKTVSGSDIIKNISESQNRDVF ELPVGFKYIAEKMIKGKIFIGGEESGGVGFGDFMPERDALYAAMVLLNGIAEKSQYLYETLDEIQEDFGPSFYKRIDIKF PNQSEKNNVKEFIIDNIPENINNHKLKSISKIDGIKLRIDKNFWLLFRFSGTEPLLRLYCEAPKESYLIEVLEWGQEFIN LARK
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI21361621, Length=475, Percent_Identity=24.4210526315789, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI290463102, Length=482, Percent_Identity=24.0663900414938, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI133922562, Length=480, Percent_Identity=23.9583333333333, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI290463104, Length=330, Percent_Identity=24.8484848484848, Blast_Score=90, Evalue=5e-18, Organism=Escherichia coli, GI1789566, Length=477, Percent_Identity=24.9475890985325, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI1788361, Length=448, Percent_Identity=24.1071428571429, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17535441, Length=523, Percent_Identity=23.9005736137667, Blast_Score=120, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6323752, Length=398, Percent_Identity=26.1306532663317, Blast_Score=106, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6322722, Length=388, Percent_Identity=26.2886597938144, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI17864244, Length=536, Percent_Identity=24.4402985074627, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI24651977, Length=432, Percent_Identity=24.3055555555556, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI20129809, Length=432, Percent_Identity=24.3055555555556, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24653722, Length=432, Percent_Identity=23.1481481481481, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 55066; Mature: 55066
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRADKLDKIKFGTDGWRGIIGFDFNLSNLSRVVVAACQELHYQYYKEVNSKKIIIGYDRR CCCCCCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCH FMACEFAKQIVPFVRGCGFEPILSDGFVTTPSCSFYAKEVGCLGALVITASHNPYNWLGL HHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHCCEEEEEEEECCCCCEEEEE KIKSLNGCSVDESFTREVEKRLMLGNSIEKIDGITQLVDIKKFHLDRIKSLFDINYISKR EEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKKMKLKIFVDSMHGSAANCMAEIFASNDLEVISEIRKDADPFFGGKPPEPLLNYADDLK HHHHHHEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH QTLMKNSTNEVKTLGIIFDGDGDRIAAIDEKGRYSSTQDLLPYFIKYLGEIKNNSYPVLK HHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE TVSGSDIIKNISESQNRDVFELPVGFKYIAEKMIKGKIFIGGEESGGVGFGDFMPERDAL ECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCEEEECCCCCCCCCCHHCCCCHHHH YAAMVLLNGIAEKSQYLYETLDEIQEDFGPSFYKRIDIKFPNQSEKNNVKEFIIDNIPEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCHHHHHHHHHHCCCCC INNHKLKSISKIDGIKLRIDKNFWLLFRFSGTEPLLRLYCEAPKESYLIEVLEWGQEFIN CCCHHHHHHHHCCCEEEEEECCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH LARK HHCC >Mature Secondary Structure MRADKLDKIKFGTDGWRGIIGFDFNLSNLSRVVVAACQELHYQYYKEVNSKKIIIGYDRR CCCCCCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCH FMACEFAKQIVPFVRGCGFEPILSDGFVTTPSCSFYAKEVGCLGALVITASHNPYNWLGL HHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHCCEEEEEEEECCCCCEEEEE KIKSLNGCSVDESFTREVEKRLMLGNSIEKIDGITQLVDIKKFHLDRIKSLFDINYISKR EEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKKMKLKIFVDSMHGSAANCMAEIFASNDLEVISEIRKDADPFFGGKPPEPLLNYADDLK HHHHHHEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH QTLMKNSTNEVKTLGIIFDGDGDRIAAIDEKGRYSSTQDLLPYFIKYLGEIKNNSYPVLK HHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE TVSGSDIIKNISESQNRDVFELPVGFKYIAEKMIKGKIFIGGEESGGVGFGDFMPERDAL ECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCEEEECCCCCCCCCCHHCCCCHHHH YAAMVLLNGIAEKSQYLYETLDEIQEDFGPSFYKRIDIKFPNQSEKNNVKEFIIDNIPEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCHHHHHHHHHHCCCCC INNHKLKSISKIDGIKLRIDKNFWLLFRFSGTEPLLRLYCEAPKESYLIEVLEWGQEFIN CCCHHHHHHHHCCCEEEEEECCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH LARK HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]