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The map label for this gene is yisS [H]

Identifier: 123967832

GI number: 123967832

Start: 272134

End: 273138

Strand: Reverse

Name: yisS [H]

Synonym: A9601_02951

Alternate gene names: 123967832

Gene position: 273138-272134 (Counterclockwise)

Preceding gene: 123967834

Following gene: 123967829

Centisome position: 16.36

GC content: 35.82

Gene sequence:

>1005_bases
ATGCAACCAACCTCATCACCCGTAAAGGTTGGAGTCATAGGTATAGGAAATATGGGATGGCATCATGCTCGAGTACTAAG
TTTACTCAAAGATGCAAATCTCATTGGAGTCGCAGATCCAAATGAAGAGAGAGGCAAATTAGCTATTGAACAATTTCAAT
GTGAATGGTTCAAAGATTATAAGGACCTAATTCCAAAAGTTGATGCTATCTGTATCGCCGTCCCAACACTACTTCATCAA
AAAGTAGGACTAGATTGTCTTAAGAGAGGAGCTAACGTTCTCATTGAAAAACCAATTGCAGCTAACGAGTTGGAAGCAAA
ATCTTTGATAGAGGCCGCTAATGAGAGTAACTGTCTATTACAAGTTGGGCATATTGAAAGATTTAATCCTGCTTTCAGAG
AATTAAATAAAATAGTAAATAATGAAGAAATTGTTGTTTTAGAAGCAAGGAGGCACAGTCCTCATGCAGACAGAGCAAAT
GATGTATCTGTCGTAATGGATTTAATGATTCATGACATTGATCTTATTTTGGAGCTTGTAAACTCAAAAATACAAAAATT
AGCAGCAGTTGGAGGAAGAAATAGCGAAGGATTAATAGATTATGTCAATGCTACTTTAGTTTTTAAAAATAATGTTATTG
CAAGCCTAACTGCAAGCAAAATGAGTCACAAAAAAATTAGAAATTTAAGTGCTCACTGCCAAAATAGCCTAGTAGAAACT
GATTTTTTAAATCACTCTTTACAAATCCATCGAAAGTCTCATGAATCATACACAGCTGAGCATGGAGAATTAGTTTATAG
AAATGATGGATATGTCGAAGAAGTTAGCACAACCTCCATTGAACCTCTTTATGCAGAACTGGAGCATTTTCTTAAGTGCG
TTCAAGGTAAAGAGACACCTGAGGTAGATGGTGAGCAAGCCTCAAGAGCTTTGAAAATTGCTGATTTTATAGAGCGTGCT
GTAGAAAATTCTGGAGATGCAATTTTACTTGAAAATCCTTTCTAA

Upstream 100 bases:

>100_bases
TGTCAGGTCCAAAAATTGATCGTGTTAAAATAATTCTTCCCAAAAGCTAAATGTGACTCCCCATGGAGGATAATGATAAT
GAATATATGGATTTAAAATT

Downstream 100 bases:

>100_bases
TACTAACAATCTAAACTAAAAGAATTTTATTTAAATCCAACAGCAGCTTGCCAAACAAACACTAATAAAAAGAAAAATAA
AGGAATCAGTGGAAGAACAT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQPTSSPVKVGVIGIGNMGWHHARVLSLLKDANLIGVADPNEERGKLAIEQFQCEWFKDYKDLIPKVDAICIAVPTLLHQ
KVGLDCLKRGANVLIEKPIAANELEAKSLIEAANESNCLLQVGHIERFNPAFRELNKIVNNEEIVVLEARRHSPHADRAN
DVSVVMDLMIHDIDLILELVNSKIQKLAAVGGRNSEGLIDYVNATLVFKNNVIASLTASKMSHKKIRNLSAHCQNSLVET
DFLNHSLQIHRKSHESYTAEHGELVYRNDGYVEEVSTTSIEPLYAELEHFLKCVQGKETPEVDGEQASRALKIADFIERA
VENSGDAILLENPF

Sequences:

>Translated_334_residues
MQPTSSPVKVGVIGIGNMGWHHARVLSLLKDANLIGVADPNEERGKLAIEQFQCEWFKDYKDLIPKVDAICIAVPTLLHQ
KVGLDCLKRGANVLIEKPIAANELEAKSLIEAANESNCLLQVGHIERFNPAFRELNKIVNNEEIVVLEARRHSPHADRAN
DVSVVMDLMIHDIDLILELVNSKIQKLAAVGGRNSEGLIDYVNATLVFKNNVIASLTASKMSHKKIRNLSAHCQNSLVET
DFLNHSLQIHRKSHESYTAEHGELVYRNDGYVEEVSTTSIEPLYAELEHFLKCVQGKETPEVDGEQASRALKIADFIERA
VENSGDAILLENPF
>Mature_334_residues
MQPTSSPVKVGVIGIGNMGWHHARVLSLLKDANLIGVADPNEERGKLAIEQFQCEWFKDYKDLIPKVDAICIAVPTLLHQ
KVGLDCLKRGANVLIEKPIAANELEAKSLIEAANESNCLLQVGHIERFNPAFRELNKIVNNEEIVVLEARRHSPHADRAN
DVSVVMDLMIHDIDLILELVNSKIQKLAAVGGRNSEGLIDYVNATLVFKNNVIASLTASKMSHKKIRNLSAHCQNSLVET
DFLNHSLQIHRKSHESYTAEHGELVYRNDGYVEEVSTTSIEPLYAELEHFLKCVQGKETPEVDGEQASRALKIADFIERA
VENSGDAILLENPF

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 37149; Mature: 37149

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTSSPVKVGVIGIGNMGWHHARVLSLLKDANLIGVADPNEERGKLAIEQFQCEWFKDY
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
KDLIPKVDAICIAVPTLLHQKVGLDCLKRGANVLIEKPIAANELEAKSLIEAANESNCLL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEE
QVGHIERFNPAFRELNKIVNNEEIVVLEARRHSPHADRANDVSVVMDLMIHDIDLILELV
EECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NSKIQKLAAVGGRNSEGLIDYVNATLVFKNNVIASLTASKMSHKKIRNLSAHCQNSLVET
HHHHHHHHHHCCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFLNHSLQIHRKSHESYTAEHGELVYRNDGYVEEVSTTSIEPLYAELEHFLKCVQGKETP
HHHCCHHHHHHHHCCHHCCCCCCEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHCCCCCC
EVDGEQASRALKIADFIERAVENSGDAILLENPF
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MQPTSSPVKVGVIGIGNMGWHHARVLSLLKDANLIGVADPNEERGKLAIEQFQCEWFKDY
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
KDLIPKVDAICIAVPTLLHQKVGLDCLKRGANVLIEKPIAANELEAKSLIEAANESNCLL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEE
QVGHIERFNPAFRELNKIVNNEEIVVLEARRHSPHADRANDVSVVMDLMIHDIDLILELV
EECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NSKIQKLAAVGGRNSEGLIDYVNATLVFKNNVIASLTASKMSHKKIRNLSAHCQNSLVET
HHHHHHHHHHCCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFLNHSLQIHRKSHESYTAEHGELVYRNDGYVEEVSTTSIEPLYAELEHFLKCVQGKETP
HHHCCHHHHHHHHCCHHCCCCCCEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHCCCCCC
EVDGEQASRALKIADFIERAVENSGDAILLENPF
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]