Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123967751

Identifier: 123967751

GI number: 123967751

Start: 199937

End: 200662

Strand: Reverse

Name: 123967751

Synonym: A9601_02141

Alternate gene names: NA

Gene position: 200662-199937 (Counterclockwise)

Preceding gene: 123967753

Following gene: 123967749

Centisome position: 12.02

GC content: 27.82

Gene sequence:

>726_bases
ATGTTGAATTTAAACTTATTCAGAAATATAGGATTCCCTCTCTACTTATTTATTTATCTCATTCTGCCCTATTCAGCAAT
AACGCAAACTTTAAAAGTTGATTTTATAAGAAATTTAGAAACCTCATTAAATAAGCGAGACTTAGATTTTATTAAAAAAA
ATTTTAGAAATGATGAAAACCAAAATATTCCAAAACAATTTTCAAAGATTATTAATGATTTCCCTAACAGCAAATGGAAG
ATCAAAAGATTAAAATCTAATATTCCAGATGAAGATATTTTGCGAATAAAAGTTTCTGGGGAAAAAATAGTTAACGGAGA
AATATATATACTCGAATCTAAATTTGATTATTTATTTTCAATCGTAAATAGAAAAATAAGTGAAGGGATTATCAAAAATT
TATTCACCACAATAAGAAACGATAATAAAAAAATAGATATTAGTTTTAAAATTCCTGATAGAGTTCTTACTGGTTCAAAA
TACGATATCGATATAATTCTAAATAAGCCTCTTGAAGAAGTGATTATTGCTGGAGCTATAAAACCTCATCAAGTTAATTC
ATTGTTTGAACAAGAAATATTATTGGAACCATTGGCGTCTGGAGGGATTTTTAAAATTACAAGAGCCCCTTCAAAACCAG
GGATGCAAATTTGGTCAGGAATCATAGCTCATCCTGAGGGAATGATTACTTTCACAAAGAGCATTGATATTGTTGATGAG
ATATAG

Upstream 100 bases:

>100_bases
GGAAAAATATGGCCTCCTGTTCCACTAGCTGCAACTAATAAATTATTTTTTTTAGACATAAAAACTTAAATTAGTAGAAT
GAAAATAATAAATAATAAAT

Downstream 100 bases:

>100_bases
CCTAAGCGTCGTTTAACGCAGCCACACCTGGTAAAGTTTTACCTTCTAAAAGTTCCAAACTAGCCCCACCTCCGGTAGAT
ATATGAGACATTTTCTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLNLNLFRNIGFPLYLFIYLILPYSAITQTLKVDFIRNLETSLNKRDLDFIKKNFRNDENQNIPKQFSKIINDFPNSKWK
IKRLKSNIPDEDILRIKVSGEKIVNGEIYILESKFDYLFSIVNRKISEGIIKNLFTTIRNDNKKIDISFKIPDRVLTGSK
YDIDIILNKPLEEVIIAGAIKPHQVNSLFEQEILLEPLASGGIFKITRAPSKPGMQIWSGIIAHPEGMITFTKSIDIVDE
I

Sequences:

>Translated_241_residues
MLNLNLFRNIGFPLYLFIYLILPYSAITQTLKVDFIRNLETSLNKRDLDFIKKNFRNDENQNIPKQFSKIINDFPNSKWK
IKRLKSNIPDEDILRIKVSGEKIVNGEIYILESKFDYLFSIVNRKISEGIIKNLFTTIRNDNKKIDISFKIPDRVLTGSK
YDIDIILNKPLEEVIIAGAIKPHQVNSLFEQEILLEPLASGGIFKITRAPSKPGMQIWSGIIAHPEGMITFTKSIDIVDE
I
>Mature_241_residues
MLNLNLFRNIGFPLYLFIYLILPYSAITQTLKVDFIRNLETSLNKRDLDFIKKNFRNDENQNIPKQFSKIINDFPNSKWK
IKRLKSNIPDEDILRIKVSGEKIVNGEIYILESKFDYLFSIVNRKISEGIIKNLFTTIRNDNKKIDISFKIPDRVLTGSK
YDIDIILNKPLEEVIIAGAIKPHQVNSLFEQEILLEPLASGGIFKITRAPSKPGMQIWSGIIAHPEGMITFTKSIDIVDE
I

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27799; Mature: 27799

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLNLFRNIGFPLYLFIYLILPYSAITQTLKVDFIRNLETSLNKRDLDFIKKNFRNDEN
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
QNIPKQFSKIINDFPNSKWKIKRLKSNIPDEDILRIKVSGEKIVNGEIYILESKFDYLFS
CCHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCEEEEEECCCEEECCEEEEEECHHHHHHH
IVNRKISEGIIKNLFTTIRNDNKKIDISFKIPDRVLTGSKYDIDIILNKPLEEVIIAGAI
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCCCCEEEEEEECCCHHHHHHHCCC
KPHQVNSLFEQEILLEPLASGGIFKITRAPSKPGMQIWSGIIAHPEGMITFTKSIDIVDE
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCHHCC
I
C
>Mature Secondary Structure
MLNLNLFRNIGFPLYLFIYLILPYSAITQTLKVDFIRNLETSLNKRDLDFIKKNFRNDEN
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
QNIPKQFSKIINDFPNSKWKIKRLKSNIPDEDILRIKVSGEKIVNGEIYILESKFDYLFS
CCHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCEEEEEECCCEEECCEEEEEECHHHHHHH
IVNRKISEGIIKNLFTTIRNDNKKIDISFKIPDRVLTGSKYDIDIILNKPLEEVIIAGAI
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCCCCEEEEEEECCCHHHHHHHCCC
KPHQVNSLFEQEILLEPLASGGIFKITRAPSKPGMQIWSGIIAHPEGMITFTKSIDIVDE
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCHHCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA