| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is menC
Identifier: 123967730
GI number: 123967730
Start: 178658
End: 179623
Strand: Reverse
Name: menC
Synonym: A9601_01931
Alternate gene names: NA
Gene position: 179623-178658 (Counterclockwise)
Preceding gene: 123967731
Following gene: 123967729
Centisome position: 10.76
GC content: 28.47
Gene sequence:
>966_bases ATGAACTTAATATTTCAAAAAAAATCTTATAGCTTTAAGTTATCGGAAAAAGTAGAAAATTCTAAAACCAATTACCATAC AAAATCGGGTTGGATAATTAAATTAATAAGGAATGATAAAAAAATAGGGTTTGGAGAAGTTTCACCGCTATATAAAAAAG ACTTAAAAAAGTGTGCGAAAGAACTAGATATGATCCCTGAATATATAGAGGAATTTAATTTATCTGAGCAAATAAATATT TTTCACCCATGTATTCAATCTGCAATAAATTCTGCATTAGCTGAGATCAATGGAAAAATAATTTTTAAAGAAAACTACTA CTTTGATGAAATTGGTAAAACAGCCATATTGTTAAATCATGAAAATGTAGTTTCAGATCTAAATAAAATTAAAAAAAGAC AATCTGATATTGGAAAATCATTAACCATAAAATGGAAAGTAGCATTAAAAAATAATCAAGAGGAAGAAGCAAGTTTAGAA GAAATTTTAAGCCAAATAGGCAATAATATTAAGTTAAGAATAGATGCTAATGGTTCTTGGGGAAGAGAGATAGCTAATAG ATGGGCTGATATTTTGAAGGATAACAAAAATGTAGATTGGTTAGAACAACCTCTCTGTGTTGATGATATTGATGGACTGA CAGAACTAAACAAAAAAATCCCTATAGCCTTAGACGAATCACTTTTAAAATTTCCAAATTTGATTAATGAGTGGAAAGGT TGGCAAATTAGAAGGCCTTCTCAAGAAAATAATCCAGTTAATCTTTTAAGAGAATTAGAAAATAAAAAAGCTTTAATATC TATAAGTACCTCATTTGAAACTGGTATAGGGAAGAGATGGCTTTATCATTTATCGTCTCTACAATTACAAGGACCAACTC CAAAAGTTCCTGGTTTAGCAATGAATAAATTCCCTAATTCGTTTCTATTTTTAAATGAAGCAAAAAAGATATGGGATCAA CTATGA
Upstream 100 bases:
>100_bases CTTCTGCAATAAAAAATTGCAAATTCGTCGCAATAAAATTTCAAACTCTTAATGGGATTGGTTTAATTACAGGATTAATA TTTAATTACTTGCTAAATAA
Downstream 100 bases:
>100_bases AAAATAAAATTCATACTATTGAAGTTGAAAATAACGAAACTCAATCTGTTGAGAAAATTATTGAAAAAATTAGAGAGAAT AAAATTATTTATGTAAAAAA
Product: putative O-succinylbenzoate synthase
Products: NA
Alternate protein names: O-Succinylbenzoate-CoA Synthase; O-Succinylbenzoic Acid Synthetase; Mandelate Racemase/Muconate Lactonizing Protein
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNLIFQKKSYSFKLSEKVENSKTNYHTKSGWIIKLIRNDKKIGFGEVSPLYKKDLKKCAKELDMIPEYIEEFNLSEQINI FHPCIQSAINSALAEINGKIIFKENYYFDEIGKTAILLNHENVVSDLNKIKKRQSDIGKSLTIKWKVALKNNQEEEASLE EILSQIGNNIKLRIDANGSWGREIANRWADILKDNKNVDWLEQPLCVDDIDGLTELNKKIPIALDESLLKFPNLINEWKG WQIRRPSQENNPVNLLRELENKKALISISTSFETGIGKRWLYHLSSLQLQGPTPKVPGLAMNKFPNSFLFLNEAKKIWDQ L
Sequences:
>Translated_321_residues MNLIFQKKSYSFKLSEKVENSKTNYHTKSGWIIKLIRNDKKIGFGEVSPLYKKDLKKCAKELDMIPEYIEEFNLSEQINI FHPCIQSAINSALAEINGKIIFKENYYFDEIGKTAILLNHENVVSDLNKIKKRQSDIGKSLTIKWKVALKNNQEEEASLE EILSQIGNNIKLRIDANGSWGREIANRWADILKDNKNVDWLEQPLCVDDIDGLTELNKKIPIALDESLLKFPNLINEWKG WQIRRPSQENNPVNLLRELENKKALISISTSFETGIGKRWLYHLSSLQLQGPTPKVPGLAMNKFPNSFLFLNEAKKIWDQ L >Mature_321_residues MNLIFQKKSYSFKLSEKVENSKTNYHTKSGWIIKLIRNDKKIGFGEVSPLYKKDLKKCAKELDMIPEYIEEFNLSEQINI FHPCIQSAINSALAEINGKIIFKENYYFDEIGKTAILLNHENVVSDLNKIKKRQSDIGKSLTIKWKVALKNNQEEEASLE EILSQIGNNIKLRIDANGSWGREIANRWADILKDNKNVDWLEQPLCVDDIDGLTELNKKIPIALDESLLKFPNLINEWKG WQIRRPSQENNPVNLLRELENKKALISISTSFETGIGKRWLYHLSSLQLQGPTPKVPGLAMNKFPNSFLFLNEAKKIWDQ L
Specific function: Unknown
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.-
Molecular weight: Translated: 37058; Mature: 37058
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIFQKKSYSFKLSEKVENSKTNYHTKSGWIIKLIRNDKKIGFGEVSPLYKKDLKKCAK CCCEEECCCCCEEHHHHHHCCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH ELDMIPEYIEEFNLSEQINIFHPCIQSAINSALAEINGKIIFKENYYFDEIGKTAILLNH HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCEEEEEEC ENVVSDLNKIKKRQSDIGKSLTIKWKVALKNNQEEEASLEEILSQIGNNIKLRIDANGSW HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCH GREIANRWADILKDNKNVDWLEQPLCVDDIDGLTELNKKIPIALDESLLKFPNLINEWKG HHHHHHHHHHHHHCCCCCCHHHCCCCHHCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHCC WQIRRPSQENNPVNLLRELENKKALISISTSFETGIGKRWLYHLSSLQLQGPTPKVPGLA CEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHEEECCCCCCCCCCC MNKFPNSFLFLNEAKKIWDQL HHHCCCCEEEHHHHHHHHHCC >Mature Secondary Structure MNLIFQKKSYSFKLSEKVENSKTNYHTKSGWIIKLIRNDKKIGFGEVSPLYKKDLKKCAK CCCEEECCCCCEEHHHHHHCCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH ELDMIPEYIEEFNLSEQINIFHPCIQSAINSALAEINGKIIFKENYYFDEIGKTAILLNH HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCEEEEEEC ENVVSDLNKIKKRQSDIGKSLTIKWKVALKNNQEEEASLEEILSQIGNNIKLRIDANGSW HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCH GREIANRWADILKDNKNVDWLEQPLCVDDIDGLTELNKKIPIALDESLLKFPNLINEWKG HHHHHHHHHHHHHCCCCCCHHHCCCCHHCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHCC WQIRRPSQENNPVNLLRELENKKALISISTSFETGIGKRWLYHLSSLQLQGPTPKVPGLA CEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHEEECCCCCCCCCCC MNKFPNSFLFLNEAKKIWDQL HHHCCCCEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA