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The map label for this gene is rbfA [H]

Identifier: 123967667

GI number: 123967667

Start: 124385

End: 124777

Strand: Direct

Name: rbfA [H]

Synonym: A9601_01301

Alternate gene names: 123967667

Gene position: 124385-124777 (Clockwise)

Preceding gene: 123967666

Following gene: 123967668

Centisome position: 7.45

GC content: 30.03

Gene sequence:

>393_bases
ATGCCGAATAACTACCGTCTTGAAAAAGTTTCTTCTCTTTTGAAGAAAGAAATAACCCTTATTTTGCAGAATGATTTAGA
AAATGATCTTATTAGAGATCATTTCGTCAATATTTCTAAGATTGATTTATCAGGTGATTTGCAACACTGTAAAATTTATA
TAACTTCAACTGCTCAAGAGAAAGTGAGGACAGAGATTGTTGAAAACTTGAATACTGCTAAAAGTTCTATAAGGCATAGT
TTAGGAAAAAGAATTGAGATGAGAAGAGTTCCAGAGATAATTTTTAAAGACGATGTTGTTCTTGATAAAGGATTATCAGT
CTTGAAACTTCTCGATGAATTAAAAAATAAAAATCAAAATCATAATGTTGAGGACAAGGATGCCAAAAGTTGA

Upstream 100 bases:

>100_bases
CACTCACAATAGTAGGTTTGATATCTTCTGTCTTAAGTGCTTTCATAACTGTTTATTTTGTCTTGCAAGCGATGACAAAC
CCAATAAATTTACAACCATA

Downstream 100 bases:

>100_bases
TCTACCCCTTGATCAAAGAAATATAATTATTACTCGATCAAAAGAAGGGATATTGGATATAAAAAAGATATTCATAAGCA
AGGGCGCTAATGTATTTGAT

Product: ribosome-binding factor A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MPNNYRLEKVSSLLKKEITLILQNDLENDLIRDHFVNISKIDLSGDLQHCKIYITSTAQEKVRTEIVENLNTAKSSIRHS
LGKRIEMRRVPEIIFKDDVVLDKGLSVLKLLDELKNKNQNHNVEDKDAKS

Sequences:

>Translated_130_residues
MPNNYRLEKVSSLLKKEITLILQNDLENDLIRDHFVNISKIDLSGDLQHCKIYITSTAQEKVRTEIVENLNTAKSSIRHS
LGKRIEMRRVPEIIFKDDVVLDKGLSVLKLLDELKNKNQNHNVEDKDAKS
>Mature_129_residues
PNNYRLEKVSSLLKKEITLILQNDLENDLIRDHFVNISKIDLSGDLQHCKIYITSTAQEKVRTEIVENLNTAKSSIRHSL
GKRIEMRRVPEIIFKDDVVLDKGLSVLKLLDELKNKNQNHNVEDKDAKS

Specific function: Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA [H]

COG id: COG0858

COG function: function code J; Ribosome-binding factor A

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbfA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR000238
- InterPro:   IPR020053
- ProDom:   PD007327 [H]

Pfam domain/function: PF02033 RBFA [H]

EC number: NA

Molecular weight: Translated: 15023; Mature: 14891

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS01319 RBFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNNYRLEKVSSLLKKEITLILQNDLENDLIRDHFVNISKIDLSGDLQHCKIYITSTAQE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCHHH
KVRTEIVENLNTAKSSIRHSLGKRIEMRRVPEIIFKDDVVLDKGLSVLKLLDELKNKNQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHCCCCC
HNVEDKDAKS
CCCCCCCCCC
>Mature Secondary Structure 
PNNYRLEKVSSLLKKEITLILQNDLENDLIRDHFVNISKIDLSGDLQHCKIYITSTAQE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCHHH
KVRTEIVENLNTAKSSIRHSLGKRIEMRRVPEIIFKDDVVLDKGLSVLKLLDELKNKNQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHCCCCC
HNVEDKDAKS
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA