| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is bcp [H]
Identifier: 123967629
GI number: 123967629
Start: 95979
End: 96446
Strand: Direct
Name: bcp [H]
Synonym: A9601_00921
Alternate gene names: 123967629
Gene position: 95979-96446 (Clockwise)
Preceding gene: 123967627
Following gene: 123967632
Centisome position: 5.75
GC content: 29.7
Gene sequence:
>468_bases ATGGCTCTTAAGGTTGGCGACAAAGCACCAGAATTTAAATTAAAAGATTCTTTTGAGAAAGAAGTTTCTCTTAGTGACTT TAAAGGTAAAAGAATAATACTATATTTTTATCCAAAAGATAATACTCCTGGATGTACTAAAGAAGCATGTAACTTTAAAG AGAATTGGGATTTACTCCAAAAAAATAATATTGTTGTGCTTGGTATTAGTAAGGATAATGCATCCTCTCATCAGAGGTTT ATAGAAAAATTTAATTTACCTTTTATTCTTTTAACTGATCCTGAACCTTTCAAAGTTTCTTCTGATTACGATAGCTACGG TCTGAAAAAATTCATGGGAAAAGAATATATGGGAATGATGAGAAATACTTTTTTAATTGATACTGAAGGTAACATAGAAA AAATTTACTTAAAGGTAAAAGCAGCAATAATGGCTGATCATATAATTGCAGACCTTGGGTTAAGCTAA
Upstream 100 bases:
>100_bases GCAGTTTTAATTTCTTCTATAGTTGCGACATCTTGCACACCTTTAATCTCATAAAACCAAATTTTTGGTATTTTATATTC ATACTCATTTAATAATTTCA
Downstream 100 bases:
>100_bases TTTTTTTATAGATAGGTGGTGAATAATCATCCCCTCCATAACTAAATTAGGAGCATTGATAATATTTTCTTTTTTAGTTT TTAGAGATTTTGTGATTAAT
Product: putative bacterioferritin comigratory (BCP) protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MALKVGDKAPEFKLKDSFEKEVSLSDFKGKRIILYFYPKDNTPGCTKEACNFKENWDLLQKNNIVVLGISKDNASSHQRF IEKFNLPFILLTDPEPFKVSSDYDSYGLKKFMGKEYMGMMRNTFLIDTEGNIEKIYLKVKAAIMADHIIADLGLS
Sequences:
>Translated_155_residues MALKVGDKAPEFKLKDSFEKEVSLSDFKGKRIILYFYPKDNTPGCTKEACNFKENWDLLQKNNIVVLGISKDNASSHQRF IEKFNLPFILLTDPEPFKVSSDYDSYGLKKFMGKEYMGMMRNTFLIDTEGNIEKIYLKVKAAIMADHIIADLGLS >Mature_154_residues ALKVGDKAPEFKLKDSFEKEVSLSDFKGKRIILYFYPKDNTPGCTKEACNFKENWDLLQKNNIVVLGISKDNASSHQRFI EKFNLPFILLTDPEPFKVSSDYDSYGLKKFMGKEYMGMMRNTFLIDTEGNIEKIYLKVKAAIMADHIIADLGLS
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=147, Percent_Identity=44.8979591836735, Blast_Score=128, Evalue=2e-31, Organism=Caenorhabditis elegans, GI32565831, Length=145, Percent_Identity=32.4137931034483, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193204376, Length=145, Percent_Identity=32.4137931034483, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322180, Length=94, Percent_Identity=38.2978723404255, Blast_Score=75, Evalue=4e-15, Organism=Drosophila melanogaster, GI17738015, Length=144, Percent_Identity=34.7222222222222, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17749; Mature: 17618
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKVGDKAPEFKLKDSFEKEVSLSDFKGKRIILYFYPKDNTPGCTKEACNFKENWDLLQ CEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCEEE KNNIVVLGISKDNASSHQRFIEKFNLPFILLTDPEPFKVSSDYDSYGLKKFMGKEYMGMM CCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHHHCHHHHHHH RNTFLIDTEGNIEKIYLKVKAAIMADHIIADLGLS HCEEEEECCCCEEEEEEEEHHHHHHHHHHHHCCCC >Mature Secondary Structure ALKVGDKAPEFKLKDSFEKEVSLSDFKGKRIILYFYPKDNTPGCTKEACNFKENWDLLQ EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCEEE KNNIVVLGISKDNASSHQRFIEKFNLPFILLTDPEPFKVSSDYDSYGLKKFMGKEYMGMM CCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHHHCHHHHHHH RNTFLIDTEGNIEKIYLKVKAAIMADHIIADLGLS HCEEEEECCCCEEEEEEEEHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]