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The map label for this gene is sufD [C]

Identifier: 123967620

GI number: 123967620

Start: 86855

End: 88072

Strand: Reverse

Name: sufD [C]

Synonym: A9601_00831

Alternate gene names: 123967620

Gene position: 88072-86855 (Counterclockwise)

Preceding gene: 123967621

Following gene: 123967619

Centisome position: 5.27

GC content: 28.41

Gene sequence:

>1218_bases
ATGGAAATTATTGAAAAAATAAAAACTAATAAATCGATTGATAATCAAACAGAAATACAAAAAATCTGTCTAAATAAATT
ACAATCAAGTCCCCTCCCTAATCCTAAAAGTGAACAATGGAGACTTTCAAATAAATCAAAATTTTCAGAGTTTTTAGACT
ACTCGGTCAATGAAACAGATCCAAAATTTGATACACCTTTTCCGAACATTTCTCAAAGTAATATTAGGTTAGTAATTGGG
AATAATTTCCAAATTGATTTAATAGAGGAAAATTATTCAATAAAGCAACTAAGTGAGGATAAATTAGTTAAATATATCAA
GGAACAGATATCTTGTTTTGATCACAACGAAAATTGGAGTGACTTACTAAACCTGTCTTTAAACTGTACAAAAAATACCT
TGGGATTAAAAATAAGTGGATCAGAAATTCCTCCTATTGAAATTTTTAGTCACTCATCAAGTAACTCTTTAAACGCAAAA
ACCCTGGTAATATTTATAGAAAAGGATTGTGATATTGATTTATTACAAGTAAATCTTGGTAAAGACAACTCTTCATTATC
TCAATCAACGTTCTTTTGTTTAGAAGAAAATAGTTCCGTAAATCATGGTGTTGTTTCTTACGGTGAAAACAAATCAAATC
TATTAAATTCTCTCAATGTAATTCAACGAAAAAATAGCGAATACAATTTAGGATCTTTACATTTCAAATTTAATTATGCA
AGATTTGAAATTCGTATTACACAATCTGAAGGAAACGCTAAAACCAATATTAAAGGTATGCAAATAACAAAAAAAGACGA
ACAAATTTCTACTTATACAAAAATAGACTTTAATGGCCCAAATGGATTTCTAGATCAAATCAACAAATCACTTGCTGACG
ATGAATCTCATGCAATATTTGAAGGTTCAATAATAGTTCCTAAAATTGCCCAGAAAACTGATGCTTCTCAATTAAGTAGG
AATTTACTTTTATCAAATCTCGCACAAATAGATACCAAACCTCAATTAGAAATAATTGCTGATGACGTCAAATGCAAACA
TGGAGCTACAATATCGCAATTAAATGAAGATGAACTTTTTTATATGAGATCAAGAGGGATCACATTACCAGAAGCAAGTA
AACTACAATTAAGTTCATACTTTCAAGAAATAATTTCATTTATTCCCGTTTCAAAAGATAGATGGGATTTGCTTGATAAA
CTTTTAAATGAAAAATAA

Upstream 100 bases:

>100_bases
GACGGACAAATCATAAAAACAGGTGAGAGTGATCTTGCTTTAGAGCTTGAGAAAAAAGGGTATGAATGGACTGATAACTT
TATAAAAGAGACCTAAGTAA

Downstream 100 bases:

>100_bases
TGGAAACGATTCAAAATTTTCCTGAAATAACTAAGAAAGACTTTCCTCTTTTAAATAACAACATAAAAAATAATGAGCAA
ATCATTTATTTAGACCATGC

Product: ABC transporter, membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MEIIEKIKTNKSIDNQTEIQKICLNKLQSSPLPNPKSEQWRLSNKSKFSEFLDYSVNETDPKFDTPFPNISQSNIRLVIG
NNFQIDLIEENYSIKQLSEDKLVKYIKEQISCFDHNENWSDLLNLSLNCTKNTLGLKISGSEIPPIEIFSHSSSNSLNAK
TLVIFIEKDCDIDLLQVNLGKDNSSLSQSTFFCLEENSSVNHGVVSYGENKSNLLNSLNVIQRKNSEYNLGSLHFKFNYA
RFEIRITQSEGNAKTNIKGMQITKKDEQISTYTKIDFNGPNGFLDQINKSLADDESHAIFEGSIIVPKIAQKTDASQLSR
NLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEDELFYMRSRGITLPEASKLQLSSYFQEIISFIPVSKDRWDLLDK
LLNEK

Sequences:

>Translated_405_residues
MEIIEKIKTNKSIDNQTEIQKICLNKLQSSPLPNPKSEQWRLSNKSKFSEFLDYSVNETDPKFDTPFPNISQSNIRLVIG
NNFQIDLIEENYSIKQLSEDKLVKYIKEQISCFDHNENWSDLLNLSLNCTKNTLGLKISGSEIPPIEIFSHSSSNSLNAK
TLVIFIEKDCDIDLLQVNLGKDNSSLSQSTFFCLEENSSVNHGVVSYGENKSNLLNSLNVIQRKNSEYNLGSLHFKFNYA
RFEIRITQSEGNAKTNIKGMQITKKDEQISTYTKIDFNGPNGFLDQINKSLADDESHAIFEGSIIVPKIAQKTDASQLSR
NLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEDELFYMRSRGITLPEASKLQLSSYFQEIISFIPVSKDRWDLLDK
LLNEK
>Mature_405_residues
MEIIEKIKTNKSIDNQTEIQKICLNKLQSSPLPNPKSEQWRLSNKSKFSEFLDYSVNETDPKFDTPFPNISQSNIRLVIG
NNFQIDLIEENYSIKQLSEDKLVKYIKEQISCFDHNENWSDLLNLSLNCTKNTLGLKISGSEIPPIEIFSHSSSNSLNAK
TLVIFIEKDCDIDLLQVNLGKDNSSLSQSTFFCLEENSSVNHGVVSYGENKSNLLNSLNVIQRKNSEYNLGSLHFKFNYA
RFEIRITQSEGNAKTNIKGMQITKKDEQISTYTKIDFNGPNGFLDQINKSLADDESHAIFEGSIIVPKIAQKTDASQLSR
NLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEDELFYMRSRGITLPEASKLQLSSYFQEIISFIPVSKDRWDLLDK
LLNEK

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=141, Percent_Identity=39.7163120567376, Blast_Score=105, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46023; Mature: 46023

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIEKIKTNKSIDNQTEIQKICLNKLQSSPLPNPKSEQWRLSNKSKFSEFLDYSVNETD
CCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCC
PKFDTPFPNISQSNIRLVIGNNFQIDLIEENYSIKQLSEDKLVKYIKEQISCFDHNENWS
CCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCCHH
DLLNLSLNCTKNTLGLKISGSEIPPIEIFSHSSSNSLNAKTLVIFIEKDCDIDLLQVNLG
HHHEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEC
KDNSSLSQSTFFCLEENSSVNHGVVSYGENKSNLLNSLNVIQRKNSEYNLGSLHFKFNYA
CCCCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
RFEIRITQSEGNAKTNIKGMQITKKDEQISTYTKIDFNGPNGFLDQINKSLADDESHAIF
EEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEE
EGSIIVPKIAQKTDASQLSRNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEDELF
ECCEEECCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCCEE
YMRSRGITLPEASKLQLSSYFQEIISFIPVSKDRWDLLDKLLNEK
EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MEIIEKIKTNKSIDNQTEIQKICLNKLQSSPLPNPKSEQWRLSNKSKFSEFLDYSVNETD
CCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCC
PKFDTPFPNISQSNIRLVIGNNFQIDLIEENYSIKQLSEDKLVKYIKEQISCFDHNENWS
CCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCCHH
DLLNLSLNCTKNTLGLKISGSEIPPIEIFSHSSSNSLNAKTLVIFIEKDCDIDLLQVNLG
HHHEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEC
KDNSSLSQSTFFCLEENSSVNHGVVSYGENKSNLLNSLNVIQRKNSEYNLGSLHFKFNYA
CCCCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
RFEIRITQSEGNAKTNIKGMQITKKDEQISTYTKIDFNGPNGFLDQINKSLADDESHAIF
EEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEE
EGSIIVPKIAQKTDASQLSRNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEDELF
ECCEEECCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCCEE
YMRSRGITLPEASKLQLSSYFQEIISFIPVSKDRWDLLDKLLNEK
EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]