| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123967608
Identifier: 123967608
GI number: 123967608
Start: 75426
End: 76814
Strand: Reverse
Name: 123967608
Synonym: A9601_00711
Alternate gene names: NA
Gene position: 76814-75426 (Counterclockwise)
Preceding gene: 123967610
Following gene: 123967603
Centisome position: 4.6
GC content: 30.45
Gene sequence:
>1389_bases TTGCTTAAAACCCTTTGCGGACGTGGCGGAATTGGTAGACGCGCACGTCTAAGGAGCGTGTGGCTTCGGCCTTGCGAGTT CAAGTCTCGCCGTCCGCATTTAATGTATTCTGGCTTGACTGCAATGAAAAAAAAATCAGTTGCAGTAGTTATAATTTCCA ATGGTCCTGGTGAATTAACCACATGGGTAAATCCTGTAATAGATGAGCTTAAAAAAGTAAATAGATCATTACGTGATTAC GATAAACAAGATATCACTCTTAGATTAGTCCTTGTTCCTTGCCCAAATGCCACCGGTAAAGAATTTTTAGTTGCAAATTC ATGGAATAAATTCGAATTAATTACAAAATCCAAAAGTTTTTGGAAATTATTAATAAATCCACATTCTTTTGCATATTGGC CCAAAAAAGGGGTGGTTATTTTCCTTGGTGGGGATCAATTTTGGAGCATTTTATTAGCTAAAAGATTAGGTTATTTAAAT ATTACATATGCTGAATGGGTTTCACGATGGCCTAAATGGACCAACGCAATCGCTGCTATGAATGTAAAAGTAAAAGAGTC AATACCTAAAAGATATAAATATAAATGTAAGATAATTGGCGATTTGATGGCAGATATCAAACTTAATAGCAAAATATCAT TAAGAAATAAAGAAAAACATCATATTGCATTATTGCCTGGTTCTAAGAAAGCAAAGCTTTCTGTTGGAATTCCTTTCTTC TTAGAACTTGCAGATCATATCGCTGAAGAAAATCAAAATATAAATTTTATAATTCCCATTGCCCCAACTACTGATAAAAG TGAATATTTATTTTTTCAAAGCAATAAAAATCCAATTGCTAAATATTACTCATCAAAAATCAAAACAATTAAAAACTTTA AAGACTCTCTTTTTGATTATGTAATTGAAACATCAAAAAATACAAAGATTTATCTAATCAAGAAACATCCTTGCTATGAA ATATTAAAAGAATGTGATCTTGCAATTACAACTGTTGGAGCAAATACTGCAGAATTAGCAGCAATTAGTCTTCCAATGTT AGTAATTCTGCCAACTCAACATTTAAATATGATGAATGCCTGGGATGGTATTTTTGGAGTAATAGGAAAAATTTCATTAA TAAATAGATTACTAACTTTTATAATCAAAAATTTTTATTTTAAAAAAAAGAAATTTTTTGCTTGGCCAAATATTAAAGCT AAAAGAATGATTGTCCCTGAAAGGATAGGGAATATTTCACCAATAAAAATTGCAAGAGAAGTATTATTTCTTATTAAAAA TAGAGATCAATTAAAAAGTATTAGGGATAATCTACACAAAGAAAGAGGCGATAAAGGTGCTGCAAAAAAACTTGCTTCTA TAATTCTTAATTCAATAAAAAAACTTTAA
Upstream 100 bases:
>100_bases AATAGAAAAATAATCATGATCTTCAAAAATTCTCTTTTCGAACTAGATCCTTATTTCAGCCAATAATGTATGATATTTTT AAGGTTTAGGTATCCCCCGG
Downstream 100 bases:
>100_bases CAATTACCAGGGGTCATCAATTTCAAACTTTTCTGATTTTTTATTATCTTGAACTAAATTTTGTTCGTTTAGTGGTTCAA TATCTAAAGTTTCAGTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MLKTLCGRGGIGRRARLRSVWLRPCEFKSRRPHLMYSGLTAMKKKSVAVVIISNGPGELTTWVNPVIDELKKVNRSLRDY DKQDITLRLVLVPCPNATGKEFLVANSWNKFELITKSKSFWKLLINPHSFAYWPKKGVVIFLGGDQFWSILLAKRLGYLN ITYAEWVSRWPKWTNAIAAMNVKVKESIPKRYKYKCKIIGDLMADIKLNSKISLRNKEKHHIALLPGSKKAKLSVGIPFF LELADHIAEENQNINFIIPIAPTTDKSEYLFFQSNKNPIAKYYSSKIKTIKNFKDSLFDYVIETSKNTKIYLIKKHPCYE ILKECDLAITTVGANTAELAAISLPMLVILPTQHLNMMNAWDGIFGVIGKISLINRLLTFIIKNFYFKKKKFFAWPNIKA KRMIVPERIGNISPIKIAREVLFLIKNRDQLKSIRDNLHKERGDKGAAKKLASIILNSIKKL
Sequences:
>Translated_462_residues MLKTLCGRGGIGRRARLRSVWLRPCEFKSRRPHLMYSGLTAMKKKSVAVVIISNGPGELTTWVNPVIDELKKVNRSLRDY DKQDITLRLVLVPCPNATGKEFLVANSWNKFELITKSKSFWKLLINPHSFAYWPKKGVVIFLGGDQFWSILLAKRLGYLN ITYAEWVSRWPKWTNAIAAMNVKVKESIPKRYKYKCKIIGDLMADIKLNSKISLRNKEKHHIALLPGSKKAKLSVGIPFF LELADHIAEENQNINFIIPIAPTTDKSEYLFFQSNKNPIAKYYSSKIKTIKNFKDSLFDYVIETSKNTKIYLIKKHPCYE ILKECDLAITTVGANTAELAAISLPMLVILPTQHLNMMNAWDGIFGVIGKISLINRLLTFIIKNFYFKKKKFFAWPNIKA KRMIVPERIGNISPIKIAREVLFLIKNRDQLKSIRDNLHKERGDKGAAKKLASIILNSIKKL >Mature_462_residues MLKTLCGRGGIGRRARLRSVWLRPCEFKSRRPHLMYSGLTAMKKKSVAVVIISNGPGELTTWVNPVIDELKKVNRSLRDY DKQDITLRLVLVPCPNATGKEFLVANSWNKFELITKSKSFWKLLINPHSFAYWPKKGVVIFLGGDQFWSILLAKRLGYLN ITYAEWVSRWPKWTNAIAAMNVKVKESIPKRYKYKCKIIGDLMADIKLNSKISLRNKEKHHIALLPGSKKAKLSVGIPFF LELADHIAEENQNINFIIPIAPTTDKSEYLFFQSNKNPIAKYYSSKIKTIKNFKDSLFDYVIETSKNTKIYLIKKHPCYE ILKECDLAITTVGANTAELAAISLPMLVILPTQHLNMMNAWDGIFGVIGKISLINRLLTFIIKNFYFKKKKFFAWPNIKA KRMIVPERIGNISPIKIAREVLFLIKNRDQLKSIRDNLHKERGDKGAAKKLASIILNSIKKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52967; Mature: 52967
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTLCGRGGIGRRARLRSVWLRPCEFKSRRPHLMYSGLTAMKKKSVAVVIISNGPGELT CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHCCCCEEEEEEECCCCCHH TWVNPVIDELKKVNRSLRDYDKQDITLRLVLVPCPNATGKEFLVANSWNKFELITKSKSF HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCE WKLLINPHSFAYWPKKGVVIFLGGDQFWSILLAKRLGYLNITYAEWVSRWPKWTNAIAAM EEEEECCCCEEEECCCCEEEEECCHHHHHHHHHHHCCCEEEEHHHHHHHCCHHHCHHHEE NVKVKESIPKRYKYKCKIIGDLMADIKLNSKISLRNKEKHHIALLPGSKKAKLSVGIPFF EEEHHHHCCHHHEEEEEEEEHHHHHEEECCEEEECCCCCCEEEEECCCCCCEEEECCHHH LELADHIAEENQNINFIIPIAPTTDKSEYLFFQSNKNPIAKYYSSKIKTIKNFKDSLFDY HHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH VIETSKNTKIYLIKKHPCYEILKECDLAITTVGANTAELAAISLPMLVILPTQHLNMMNA HHCCCCCCEEEEEECCCHHHHHHHCCEEEEEECCCHHHHHHHHCCEEEEECCHHCCHHHH WDGIFGVIGKISLINRLLTFIIKNFYFKKKKFFAWPNIKAKRMIVPERIGNISPIKIARE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECHHHHCCCCHHHHHHH VLFLIKNRDQLKSIRDNLHKERGDKGAAKKLASIILNSIKKL HHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKTLCGRGGIGRRARLRSVWLRPCEFKSRRPHLMYSGLTAMKKKSVAVVIISNGPGELT CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHCCCCEEEEEEECCCCCHH TWVNPVIDELKKVNRSLRDYDKQDITLRLVLVPCPNATGKEFLVANSWNKFELITKSKSF HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCE WKLLINPHSFAYWPKKGVVIFLGGDQFWSILLAKRLGYLNITYAEWVSRWPKWTNAIAAM EEEEECCCCEEEECCCCEEEEECCHHHHHHHHHHHCCCEEEEHHHHHHHCCHHHCHHHEE NVKVKESIPKRYKYKCKIIGDLMADIKLNSKISLRNKEKHHIALLPGSKKAKLSVGIPFF EEEHHHHCCHHHEEEEEEEEHHHHHEEECCEEEECCCCCCEEEEECCCCCCEEEECCHHH LELADHIAEENQNINFIIPIAPTTDKSEYLFFQSNKNPIAKYYSSKIKTIKNFKDSLFDY HHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH VIETSKNTKIYLIKKHPCYEILKECDLAITTVGANTAELAAISLPMLVILPTQHLNMMNA HHCCCCCCEEEEEECCCHHHHHHHCCEEEEEECCCHHHHHHHHCCEEEEECCHHCCHHHH WDGIFGVIGKISLINRLLTFIIKNFYFKKKKFFAWPNIKAKRMIVPERIGNISPIKIARE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECHHHHCCCCHHHHHHH VLFLIKNRDQLKSIRDNLHKERGDKGAAKKLASIILNSIKKL HHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA