| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967603
Identifier: 123967603
GI number: 123967603
Start: 69421
End: 69882
Strand: Reverse
Name: 123967603
Synonym: A9601_00661
Alternate gene names: NA
Gene position: 69882-69421 (Counterclockwise)
Preceding gene: 123967608
Following gene: 123967602
Centisome position: 4.18
GC content: 32.25
Gene sequence:
>462_bases ATGGAGACTTACCATCCTCCCAAAGAAGTAGAAGATAAAGAAGATAACTCTAATCTTCCTGAAAGAGAGGTTCTCTCGGA AAAATGGTTACTCGAAAAGATTGACAGTTTAATACCTTTAATAAAAGAAAAATGGCCTAACATTGCACAACAAACCCTTG AAGCCACAAAAGGGAGTATTGACGATTTAGTTGAAGTAATAGCAAGCCATAGTGGAACCTCAGCAATTAGAATAAAAAGC CAACTATTTGAAATAATTGATTCAATAAGAGAAAACAATTGGGAAATATCAGAAAAAATTGAGCCTATAGAAAGTCAATT AGAAGAATTATTAGAAGAACTTAACAATACACTTAGACCAAAAATAGAAAGTCCTATAAGAAAAAAACCATTATTATCTA TTGCTATTGCTGCTGGTATTGGTTTACTAATAGGAACGCTCCTAAACAGTGGTAGAAAATAA
Upstream 100 bases:
>100_bases CTTTTATATGTTTTTATTCTATATAAATCCCACAATTATTTAGATAAGGGTTCCAAATTAAGAAAATAGGGTCTAATCTT AAAATAAATTAAGTTTAATA
Downstream 100 bases:
>100_bases TATGGAAAAACCAAAAAATAAAAACTTTGCAAATACCGCCTCCAGAATTTCAGCGATTGCCAGTTCAGTTATGGATTTGC ATGTAAGAATAGCTCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues METYHPPKEVEDKEDNSNLPEREVLSEKWLLEKIDSLIPLIKEKWPNIAQQTLEATKGSIDDLVEVIASHSGTSAIRIKS QLFEIIDSIRENNWEISEKIEPIESQLEELLEELNNTLRPKIESPIRKKPLLSIAIAAGIGLLIGTLLNSGRK
Sequences:
>Translated_153_residues METYHPPKEVEDKEDNSNLPEREVLSEKWLLEKIDSLIPLIKEKWPNIAQQTLEATKGSIDDLVEVIASHSGTSAIRIKS QLFEIIDSIRENNWEISEKIEPIESQLEELLEELNNTLRPKIESPIRKKPLLSIAIAAGIGLLIGTLLNSGRK >Mature_153_residues METYHPPKEVEDKEDNSNLPEREVLSEKWLLEKIDSLIPLIKEKWPNIAQQTLEATKGSIDDLVEVIASHSGTSAIRIKS QLFEIIDSIRENNWEISEKIEPIESQLEELLEELNNTLRPKIESPIRKKPLLSIAIAAGIGLLIGTLLNSGRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17315; Mature: 17315
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METYHPPKEVEDKEDNSNLPEREVLSEKWLLEKIDSLIPLIKEKWPNIAQQTLEATKGSI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCH DDLVEVIASHSGTSAIRIKSQLFEIIDSIRENNWEISEKIEPIESQLEELLEELNNTLRP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KIESPIRKKPLLSIAIAAGIGLLIGTLLNSGRK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure METYHPPKEVEDKEDNSNLPEREVLSEKWLLEKIDSLIPLIKEKWPNIAQQTLEATKGSI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCH DDLVEVIASHSGTSAIRIKSQLFEIIDSIRENNWEISEKIEPIESQLEELLEELNNTLRP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KIESPIRKKPLLSIAIAAGIGLLIGTLLNSGRK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA