Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123967565

Identifier: 123967565

GI number: 123967565

Start: 29317

End: 30195

Strand: Reverse

Name: 123967565

Synonym: A9601_00281

Alternate gene names: NA

Gene position: 30195-29317 (Counterclockwise)

Preceding gene: 123967567

Following gene: 123967564

Centisome position: 1.81

GC content: 30.83

Gene sequence:

>879_bases
ATGAAAAAACCTGCAAGTTTAATCGGAAATAAAAATAAATTTTTAGTCTTTGGATGTGGTTTCAGCGGTAGTTATTTTGC
AAAAACTATTAAAAAATTTGGTTGCACAGTTTTAACAAGCTCAAGATCTAGAGGCATGGATCCAAATAATTTTGTTTTCA
ACAGTGAAAACGGTGTGGTTCCTGATGCAAAAATTTTTGATGGCGTAACCCATATTCTTAGTTGCATTCCTCCCGACAAA
AATGGAAAGGATCCAGTATTAAGAATTCTTAAAAATAAACTAAAAAGTTTGTCGCTAGAATGGGTTGGCTATTTATCTAC
AACAGGAGTTTACGGGAACACCAACGGTGATTGGGTTTCTGAAATTCATAAACCAAACCCCTTTCAAAAAAGAAGTTATA
AGAGGTTAAATTGTGAAAAAGAATGGATTGAATCTGGTTTACCTATACAAATTTTTAGGTTACCTGGTATTTATGGGCCT
GGAAGATCCACTTTTGAAGCAATAAAAAATAAAAAAATTCGTGTTATATCAAAAAAAAATCAGGTATTTTCGAGAATTCA
TGTTGCAGATATTGTAAATGCAATTATCTATCTATTACAAAACAAAAATTCCCTAAAGTTTTACCAAATTATTAATATTG
CAGATGATGAACCCTGTTCTCAGTTAGAGGTTATTCAATATTGCTACGATTTACTTGGTTTAACAATGCCAAAGCCAATA
TTATTTGAGGATGCGAGAGAGGAATTATCACCTATAGCTCAATCTTTTTGGATGGAAAATAGAAGAGTTTCAAATAAACT
TTTATGCGAAACACTTGGATATAAGCTAATTTATAAAAACTATAAAATAGGCTTAAAAAACTGTTACCTAAATAGATAA

Upstream 100 bases:

>100_bases
CGGGGATAACTTTTGCTAACAAAGAAAGTTTTTGATTTTAAATCGGGCTTAAGAGCTGTCTTCATCATTAATTAATACAT
ATGTACTACTTTAACGAAGC

Downstream 100 bases:

>100_bases
AAATATATTTAAAACTTTTTATGAATTTTCAAAATACAAATAAACCATTAAAGGTAGTAATAAGCGTAGGAGATGAGTCA
GGTATTGGACCCGAAATAAT

Product: nucleoside-diphosphate-sugar epimerases

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; ActC Family Protein; NAD Epimerase/Dehydratase Protein; NAD-Dependent Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKKPASLIGNKNKFLVFGCGFSGSYFAKTIKKFGCTVLTSSRSRGMDPNNFVFNSENGVVPDAKIFDGVTHILSCIPPDK
NGKDPVLRILKNKLKSLSLEWVGYLSTTGVYGNTNGDWVSEIHKPNPFQKRSYKRLNCEKEWIESGLPIQIFRLPGIYGP
GRSTFEAIKNKKIRVISKKNQVFSRIHVADIVNAIIYLLQNKNSLKFYQIINIADDEPCSQLEVIQYCYDLLGLTMPKPI
LFEDAREELSPIAQSFWMENRRVSNKLLCETLGYKLIYKNYKIGLKNCYLNR

Sequences:

>Translated_292_residues
MKKPASLIGNKNKFLVFGCGFSGSYFAKTIKKFGCTVLTSSRSRGMDPNNFVFNSENGVVPDAKIFDGVTHILSCIPPDK
NGKDPVLRILKNKLKSLSLEWVGYLSTTGVYGNTNGDWVSEIHKPNPFQKRSYKRLNCEKEWIESGLPIQIFRLPGIYGP
GRSTFEAIKNKKIRVISKKNQVFSRIHVADIVNAIIYLLQNKNSLKFYQIINIADDEPCSQLEVIQYCYDLLGLTMPKPI
LFEDAREELSPIAQSFWMENRRVSNKLLCETLGYKLIYKNYKIGLKNCYLNR
>Mature_292_residues
MKKPASLIGNKNKFLVFGCGFSGSYFAKTIKKFGCTVLTSSRSRGMDPNNFVFNSENGVVPDAKIFDGVTHILSCIPPDK
NGKDPVLRILKNKLKSLSLEWVGYLSTTGVYGNTNGDWVSEIHKPNPFQKRSYKRLNCEKEWIESGLPIQIFRLPGIYGP
GRSTFEAIKNKKIRVISKKNQVFSRIHVADIVNAIIYLLQNKNSLKFYQIINIADDEPCSQLEVIQYCYDLLGLTMPKPI
LFEDAREELSPIAQSFWMENRRVSNKLLCETLGYKLIYKNYKIGLKNCYLNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33313; Mature: 33313

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPASLIGNKNKFLVFGCGFSGSYFAKTIKKFGCTVLTSSRSRGMDPNNFVFNSENGVV
CCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCCC
PDAKIFDGVTHILSCIPPDKNGKDPVLRILKNKLKSLSLEWVGYLSTTGVYGNTNGDWVS
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCHHHH
EIHKPNPFQKRSYKRLNCEKEWIESGLPIQIFRLPGIYGPGRSTFEAIKNKKIRVISKKN
HHCCCCCHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEHHH
QVFSRIHVADIVNAIIYLLQNKNSLKFYQIINIADDEPCSQLEVIQYCYDLLGLTMPKPI
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCH
LFEDAREELSPIAQSFWMENRRVSNKLLCETLGYKLIYKNYKIGLKNCYLNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEECHHHHCCCC
>Mature Secondary Structure
MKKPASLIGNKNKFLVFGCGFSGSYFAKTIKKFGCTVLTSSRSRGMDPNNFVFNSENGVV
CCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCCC
PDAKIFDGVTHILSCIPPDKNGKDPVLRILKNKLKSLSLEWVGYLSTTGVYGNTNGDWVS
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCHHHH
EIHKPNPFQKRSYKRLNCEKEWIESGLPIQIFRLPGIYGPGRSTFEAIKNKKIRVISKKN
HHCCCCCHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEHHH
QVFSRIHVADIVNAIIYLLQNKNSLKFYQIINIADDEPCSQLEVIQYCYDLLGLTMPKPI
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCH
LFEDAREELSPIAQSFWMENRRVSNKLLCETLGYKLIYKNYKIGLKNCYLNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA